ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	109120124	putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial
sly-r.6	109120124	putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial
nta-r.1	107813009	putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial
nta-r.1	142166903	pentatricopeptide repeat-containing protein At3g50420-like
ath-u.5	AT1G23450	PPR superfamily protein
ghi-r.1	107909680	putative pentatricopeptide repeat-containing protein At3g05240
ghi-r.1	107886566	putative pentatricopeptide repeat-containing protein At5g09950
bna-r.1	106397327	pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like
cit-r.1	112498979	pentatricopeptide repeat-containing protein At4g33990
sbi-r.1	8065588	pentatricopeptide repeat-containing protein At1g74600, chloroplastic

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(280 genes)

IEA

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(5687 genes)

IEA

GO MF

GO:0003723 [list] [network] RNA binding	(1208 genes)	IEA
GO:0005515 [list] [network] protein binding	(3982 genes)	IEA

Protein

XP_019069064.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 1, E.R. 1, chlo 1, mito 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1, E.R._plas 1

(predict for XP_019069064.2)

Subcellular
localization
TargetP

other 9

(predict for XP_019069064.2)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 109120124	sly-r.6 for 109120124	nta-r.1 for 107813009	nta-r.1 for 142166903	ath-u.5 for AT1G23450	ghi-r.1 for 107909680	ghi-r.1 for 107886566	bna-r.1 for 106397327	cit-r.1 for 112498979	sbi-r.1 for 8065588