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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102612815   extradiol ring-cleavage dioxygenase-like 
 cit-r.1   102612511   extradiol ring-cleavage dioxygenase-like 
 ath-u.5   LigB   catalytic LigB subunit of aromatic ring-opening dioxygenase family 
 bra-r.6   103833499   extradiol ring-cleavage dioxygenase 
 bra-r.6   103871335   extradiol ring-cleavage dioxygenase 
 ghi-r.1   107937647   extradiol ring-cleavage dioxygenase 
 ghi-r.1   121216279   extradiol ring-cleavage dioxygenase 
 bna-r.1   125584441   extradiol ring-cleavage dioxygenase-like 
 bna-r.1   125589768   extradiol ring-cleavage dioxygenase-like 
 bna-r.1   106350814   extradiol ring-cleavage dioxygenase-like 
 gma-u.5   100810694   4,5-DOPA dioxygenase extradiol-like protein-like 
 gma-u.5   100798236   extradiol ring-cleavage dioxygenase-like 
 gma-u.5   100797161   4,5-DOPA dioxygenase extradiol 
 vvi-u.5   100244355   extradiol ring-cleavage dioxygenase 
 vvi-u.5   100262346   extradiol ring-cleavage dioxygenase 
 ppo-u.5   18109422   4,5-DOPA dioxygenase extradiol 
 ppo-u.5   7463018   4,5-DOPA dioxygenase extradiol 
 ppo-u.5   18107919   4,5-DOPA dioxygenase extradiol 
 mtr-u.5   11420281   extradiol ring-cleavage dioxygenase 
 mtr-u.5   25484511   extradiol ring-cleavage dioxygenase 
 sly-u.5   101255627   4,5-DOPA dioxygenase extradiol 
 sly-u.5   101252146   extradiol ring-cleavage dioxygenase 
 sot-r.1   102602046   4,5-DOPA dioxygenase extradiol-like 
 sot-r.1   102603836   extradiol ring-cleavage dioxygenase-like 
 nta-r.1   107819151   extradiol ring-cleavage dioxygenase 
 nta-r.1   107828854   extradiol ring-cleavage dioxygenase 
 osa-u.5   4325095   extradiol ring-cleavage dioxygenase 
 osa-u.5   4324833   extradiol ring-cleavage dioxygenase 
 zma-u.5   103650928   extradiol ring-cleavage dioxygenase 
 zma-u.5   pco060792   uncharacterized LOC100280732 
 hvu-r.1   123444740   extradiol ring-cleavage dioxygenase-like 
 hvu-r.1   123440437   extradiol ring-cleavage dioxygenase-like 
 hvu-r.1   123402453   extradiol ring-cleavage dioxygenase-like 
 sbi-r.1   8061011   extradiol ring-cleavage dioxygenase 
 bdi-r.1   100844353   extradiol ring-cleavage dioxygenase 
 bdi-r.1   100844658   extradiol ring-cleavage dioxygenase 
 cre-r.1   CHLRE_09g408600v5   uncharacterized protein 

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Top 50 coexpressed genes to 102612815 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102612815 (cit-r.1 coexpression data)

CoexMap"102606990"


citLOC102606990 | Entrez gene ID : 102606990    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma hvu sbi bdi cre tae
Paralog 2 1 2 2 3 3 2 3 2 2 2 2 2 2 3 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00965 [list] [network] Betalain biosynthesis (11 genes)
GO BP
GO CC
GO MF
GO:0008198 [list] [network] ferrous iron binding  (14 genes)  IEA  
GO:0016701 [list] [network] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen  (47 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
Protein XP_024957869.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024957869.2)
Subcellular
localization
TargetP
other 8  (predict for XP_024957869.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102612815
cit-r.1
for
102612511
ath-u.5
for
LigB
bra-r.6
for
103833499
bra-r.6
for
103871335
ghi-r.1
for
107937647
ghi-r.1
for
121216279
bna-r.1
for
125584441
bna-r.1
for
125589768
bna-r.1
for
106350814
gma-u.5
for
100810694
gma-u.5
for
100798236
gma-u.5
for
100797161
vvi-u.5
for
100244355
vvi-u.5
for
100262346
ppo-u.5
for
18109422
ppo-u.5
for
7463018
ppo-u.5
for
18107919
mtr-u.5
for
11420281
mtr-u.5
for
25484511
sly-u.5
for
101255627
sly-u.5
for
101252146
sot-r.1
for
102602046
sot-r.1
for
102603836
nta-r.1
for
107819151
nta-r.1
for
107828854
osa-u.5
for
4325095
osa-u.5
for
4324833
zma-u.5
for
103650928
zma-u.5
for
pco060792
hvu-r.1
for
123444740
hvu-r.1
for
123440437
hvu-r.1
for
123402453
sbi-r.1
for
8061011
bdi-r.1
for
100844353
bdi-r.1
for
100844658
cre-r.1
for
CHLRE_09g408600v5


Ortholog ID: 2353
Species cit cit ath bra bra ghi ghi bna bna bna gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae hvu hvu hvu sbi bdi bdi cre
Symbol LOC102612815 LOC102612511 LigB LOC103833499 LOC103871335 LOC107937647 LOC121216279 LOC125584441 LOC125589768 LOC106359577 LOC100810694 LOC100798236 LOC100797161 LOC100244355 LOC100262346 LOC7463018 LOC18107919 LOC7463019 LOC11420281 LOC25484511 LOC101255627 LOC101252146 LOC102602046 LOC102603836 LOC107819151 LOC107828854 LOC4325095 LOC4324833 LOC103650928 pco060792 LOC123079967 LOC123444740 LOC123440437 LOC123402453 LOC8061011 LOC100844353 LOC100844658 CHLRE_09g408600v5
Function* extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase-like catalytic LigB subunit of aromatic ring-opening dioxygenase family extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase 4,5-DOPA dioxygenase extradiol-like protein-like extradiol ring-cleavage dioxygenase-like 4,5-DOPA dioxygenase extradiol extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase 4,5-DOPA dioxygenase extradiol 4,5-DOPA dioxygenase extradiol extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase 4,5-DOPA dioxygenase extradiol extradiol ring-cleavage dioxygenase 4,5-DOPA dioxygenase extradiol-like extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase uncharacterized LOC100280732 extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit04120 Ubiquitin mediated proteolysis 3
cit01230 Biosynthesis of amino acids 2
cit03083 Polycomb repressive complex 2
cit00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 10
bra01230 Biosynthesis of amino acids 7
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
bra00941 Flavonoid biosynthesis 5
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 11
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
ghi00020 Citrate cycle (TCA cycle) 4
ghi00350 Tyrosine metabolism 3
ghi00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 13
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 11
ghi00350 Tyrosine metabolism 3
ghi00360 Phenylalanine metabolism 3
ghi00950 Isoquinoline alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00965 Betalain biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00965 Betalain biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00965 Betalain biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00053 Ascorbate and aldarate metabolism 5
gma02010 ABC transporters 2
gma04981 Folate transport and metabolism 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 14
gma00941 Flavonoid biosynthesis 5
gma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00592 alpha-Linolenic acid metabolism 3
ppo00480 Glutathione metabolism 2
ppo00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04136 Autophagy - other 3
ppo00965 Betalain biosynthesis 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 9
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
mtr00940 Phenylpropanoid biosynthesis 5
mtr00350 Tyrosine metabolism 3
mtr00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 10
sly00941 Flavonoid biosynthesis 5
sly00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
sly00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 9
sot00941 Flavonoid biosynthesis 5
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04070 Phosphatidylinositol signaling system 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta03272 Virion - Hepatitis viruses 4
nta03250 Viral life cycle - HIV-1 2
nta00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta03272 Virion - Hepatitis viruses 4
nta03250 Viral life cycle - HIV-1 2
nta00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 7
osa01230 Biosynthesis of amino acids 4
osa00941 Flavonoid biosynthesis 3
osa00270 Cysteine and methionine metabolism 3
osa00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
zma01230 Biosynthesis of amino acids 2
zma00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 5
tae00965 Betalain biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 4
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 9
sbi00360 Phenylalanine metabolism 8
sbi01230 Biosynthesis of amino acids 5
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00965 Betalain biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102612815 102612511 827174 103833499 103871335 107937647 121216279 125584441 125589768 106359577 100810694 100798236 100797161 100244355 100262346 7463018 18107919 7463019 11420281 25484511 101255627 101252146 102602046 102603836 107819151 107828854 4325095 4324833 103650928 100280732 123079967 123444740 123440437 123402453 8061011 100844353 100844658 5722243
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