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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g408600v5   uncharacterized protein 
 ath-u.5   LigB   catalytic LigB subunit of aromatic ring-opening dioxygenase family 
 gma-u.5   100810694   4,5-DOPA dioxygenase extradiol-like protein-like 
 gma-u.5   100797161   4,5-DOPA dioxygenase extradiol 
 gma-u.5   100798236   extradiol ring-cleavage dioxygenase-like 
 sly-u.5   101255627   4,5-DOPA dioxygenase extradiol 
 sly-u.5   101252146   extradiol ring-cleavage dioxygenase 
 osa-u.5   4325095   extradiol ring-cleavage dioxygenase 
 osa-u.5   4324833   extradiol ring-cleavage dioxygenase 
 zma-u.5   103650928   extradiol ring-cleavage dioxygenase 
 zma-u.5   pco060792   uncharacterized LOC100280732 
 vvi-u.5   100244355   extradiol ring-cleavage dioxygenase 
 vvi-u.5   100262346   extradiol ring-cleavage dioxygenase 
 ppo-u.5   7463019   extradiol ring-cleavage dioxygenase 
 ppo-u.5   18107919   4,5-DOPA dioxygenase extradiol 
 ppo-u.5   7463018   4,5-DOPA dioxygenase extradiol 
 mtr-u.5   11420281   extradiol ring-cleavage dioxygenase 
 mtr-u.5   25484511   extradiol ring-cleavage dioxygenase 

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Top 50 coexpressed genes to CHLRE_09g408600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g408600v5 (cre-r.1 coexpression data)

CoexMap"5722243"


creCHLRE_09g408600v5 | Entrez gene ID : 5722243      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 3 2 2 2 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008198 [list] [network] ferrous iron binding  (13 genes)  IEA  
GO:0016701 [list] [network] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen  (28 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (213 genes)  IEA  
Protein XP_042921519.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_042921519.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_042921519.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g408600v5

.
ath-u.5
for
LigB

.
gma-u.5
for
100810694

.
gma-u.5
for
100797161

.
gma-u.5
for
100798236

.
sly-u.5
for
101255627

.
sly-u.5
for
101252146

.
osa-u.5
for
4325095

.
osa-u.5
for
4324833

.
zma-u.5
for
103650928

.
zma-u.5
for
pco060792

.
vvi-u.5
for
100244355

.
vvi-u.5
for
100262346

.
ppo-u.5
for
7463019

.
ppo-u.5
for
18107919

.
ppo-u.5
for
7463018

.
mtr-u.5
for
11420281

.
mtr-u.5
for
25484511

.


Ortholog ID: 2353
Species ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae hvu hvu ghi ghi bna bna cre sbi sot sot cit cit bdi bdi nta nta
Symbol LigB LOC100798236 LOC100810694 LOC101252146 LOC101255627 LOC4324833 LOC4325095 LOC103650928 pco060792 LOC103871335 LOC100244355 LOC100262346 LOC18107919 LOC7463018 LOC11420281 LOC25484511 LOC123079967 LOC123444740 LOC123440437 LOC121216279 LOC107937647 LOC125589768 LOC106359577 CHLRE_09g408600v5 LOC8061011 LOC102603836 LOC102602046 LOC102612511 LOC102612815 LOC100844353 LOC100844658 LOC107828854 LOC107819151
Function* catalytic LigB subunit of aromatic ring-opening dioxygenase family extradiol ring-cleavage dioxygenase-like 4,5-DOPA dioxygenase extradiol-like protein-like extradiol ring-cleavage dioxygenase 4,5-DOPA dioxygenase extradiol extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase uncharacterized LOC100280732 extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase 4,5-DOPA dioxygenase extradiol 4,5-DOPA dioxygenase extradiol extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase uncharacterized protein extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase-like 4,5-DOPA dioxygenase extradiol-like extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase-like extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase extradiol ring-cleavage dioxygenase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 14
gma00941 Flavonoid biosynthesis 5
gma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00053 Ascorbate and aldarate metabolism 5
gma02010 ABC transporters 2
gma04981 Folate transport and metabolism 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 10
sly00941 Flavonoid biosynthesis 5
sly00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
sly00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 7
osa01230 Biosynthesis of amino acids 4
osa00941 Flavonoid biosynthesis 3
osa00270 Cysteine and methionine metabolism 3
osa00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
zma01230 Biosynthesis of amino acids 2
zma00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 10
bra01230 Biosynthesis of amino acids 7
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
bra00941 Flavonoid biosynthesis 5
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04136 Autophagy - other 3
ppo00965 Betalain biosynthesis 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00592 alpha-Linolenic acid metabolism 3
ppo00480 Glutathione metabolism 2
ppo00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 9
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
mtr00940 Phenylpropanoid biosynthesis 5
mtr00350 Tyrosine metabolism 3
mtr00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 5
tae00965 Betalain biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 4
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 13
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 11
ghi00350 Tyrosine metabolism 3
ghi00360 Phenylalanine metabolism 3
ghi00950 Isoquinoline alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 11
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
ghi00020 Citrate cycle (TCA cycle) 4
ghi00350 Tyrosine metabolism 3
ghi00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00965 Betalain biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00965 Betalain biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 9
sbi00360 Phenylalanine metabolism 8
sbi01230 Biosynthesis of amino acids 5
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04070 Phosphatidylinositol signaling system 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 9
sot00941 Flavonoid biosynthesis 5
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit04120 Ubiquitin mediated proteolysis 3
cit01230 Biosynthesis of amino acids 2
cit03083 Polycomb repressive complex 2
cit00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta03272 Virion - Hepatitis viruses 4
nta03250 Viral life cycle - HIV-1 2
nta00965 Betalain biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta03272 Virion - Hepatitis viruses 4
nta03250 Viral life cycle - HIV-1 2
nta00965 Betalain biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827174 100798236 100810694 101252146 101255627 4324833 4325095 103650928 100280732 103871335 100244355 100262346 18107919 7463018 11420281 25484511 123079967 123444740 123440437 121216279 107937647 125589768 106359577 5722243 8061011 102603836 102602046 102612511 102612815 100844353 100844658 107828854 107819151
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