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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102606996   alpha-glucan phosphorylase 2, cytosolic 
 cit-r.1   102625638   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 ath-u.5   PHS1   Glycosyl transferase, family 35 
 ath-u.5   PHS2   alpha-glucan phosphorylase 2 
 bra-r.6   103873279   alpha-glucan phosphorylase 2, cytosolic 
 bra-r.6   103875081   alpha-glucan phosphorylase 1 
 bra-r.6   103854138   alpha-glucan phosphorylase 1 
 ghi-r.1   107935941   alpha-glucan phosphorylase, H isozyme 
 ghi-r.1   107913942   glycogen phosphorylase 1 
 ghi-r.1   107905809   glycogen phosphorylase 1 
 bna-r.1   106347565   alpha-glucan phosphorylase 2, cytosolic-like 
 bna-r.1   106349116   alpha-glucan phosphorylase 1 
 bna-r.1   106352743   alpha-glucan phosphorylase 2, cytosolic 
 gma-u.5   100818065   alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic 
 gma-u.5   100789789   alpha-glucan phosphorylase, H isozyme 
 gma-u.5   100779066   glycogen phosphorylase 1 
 vvi-u.5   100245621   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 vvi-u.5   100264186   uncharacterized LOC100264186 
 vvi-u.5   100257811   alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic 
 ppo-u.5   7463047   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 ppo-u.5   7481498   alpha-glucan phosphorylase, H isozyme 
 ppo-u.5   7481544   alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic 
 mtr-u.5   11445705   alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic 
 mtr-u.5   25480821   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 mtr-u.5   11443309   glycogen phosphorylase 1 
 sly-u.5   101261874   uncharacterized LOC101261874 
 sly-u.5   101244113   alpha-glucan phosphorylase, H isozyme 
 sly-u.5   101248295   alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic 
 sot-r.1   STP-1   alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic-like 
 sot-r.1   102578187   glycogen phosphorylase 1-like 
 sot-r.1   102596766   alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic-like 
 nta-r.1   107766371   uncharacterized LOC107766371 
 nta-r.1   107771409   alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic 
 nta-r.1   107783249   uncharacterized LOC107783249 
 osa-u.5   4334171   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 osa-u.5   4324810   alpha-glucan phosphorylase, H isozyme 
 zma-u.5   100285259   uncharacterized LOC100285259 
 zma-u.5   pho1   starch phosphorylase1 
 tae-r.2   123062617   alpha-glucan phosphorylase, H isozyme-like 
 tae-r.2   123071431   alpha-glucan phosphorylase, H isozyme-like 
 tae-r.2   123079772   alpha-glucan phosphorylase, H isozyme-like 
 hvu-r.1   123444878   alpha-glucan phosphorylase, H isozyme-like 
 hvu-r.1   123444877   alpha-glucan phosphorylase, H isozyme 
 hvu-r.1   123452312   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 sbi-r.1   8060105   alpha-glucan phosphorylase, H isozyme 
 sbi-r.1   110431626   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 bdi-r.1   100827967   alpha-glucan phosphorylase, H isozyme 
 bdi-r.1   100828538   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 cre-r.1   CHLRE_12g552200v5   uncharacterized protein 
 cre-r.1   CHLRE_07g336950v5   uncharacterized protein 

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Top 50 coexpressed genes to 102606996 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102606996 (cit-r.1 coexpression data)

CoexMap"102606996"


citLOC102606996 | Entrez gene ID : 102606996    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 3 3 3 3 3 3 3 3 3 3 2 2 3 3 2 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00500 [list] [network] Starch and sucrose metabolism (144 genes)
GO BP
GO:0005980 [list] [network] glycogen catabolic process  (3 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4272 genes)  IEA  
GO MF
GO:0008184 [list] [network] glycogen phosphorylase activity  (3 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (83 genes)  IEA  
Protein XP_006488467.1 [sequence] [blastp]
XP_006488468.1 [sequence] [blastp]
XP_006488469.1 [sequence] [blastp]
XP_006488471.1 [sequence] [blastp]
XP_052287761.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for XP_006488467.1)
cyto 9  (predict for XP_006488468.1)
cyto 9  (predict for XP_006488469.1)
cyto 9  (predict for XP_006488471.1)
cyto 9  (predict for XP_052287761.1)
Subcellular
localization
TargetP
other 6  (predict for XP_006488467.1)
other 6  (predict for XP_006488468.1)
other 6  (predict for XP_006488469.1)
other 6  (predict for XP_006488471.1)
other 6  (predict for XP_052287761.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102606996
cit-r.1
for
102625638
ath-u.5
for
PHS1
ath-u.5
for
PHS2
bra-r.6
for
103873279
bra-r.6
for
103875081
bra-r.6
for
103854138
ghi-r.1
for
107935941
ghi-r.1
for
107913942
ghi-r.1
for
107905809
bna-r.1
for
106347565
bna-r.1
for
106349116
bna-r.1
for
106352743
gma-u.5
for
100818065
gma-u.5
for
100789789
gma-u.5
for
100779066
vvi-u.5
for
100245621
vvi-u.5
for
100264186
vvi-u.5
for
100257811
ppo-u.5
for
7463047
ppo-u.5
for
7481498
ppo-u.5
for
7481544
mtr-u.5
for
11445705
mtr-u.5
for
25480821
mtr-u.5
for
11443309
sly-u.5
for
101261874
sly-u.5
for
101244113
sly-u.5
for
101248295
sot-r.1
for
STP-1
sot-r.1
for
102578187
sot-r.1
for
102596766
nta-r.1
for
107766371
nta-r.1
for
107771409
nta-r.1
for
107783249
osa-u.5
for
4334171
osa-u.5
for
4324810
zma-u.5
for
100285259
zma-u.5
for
pho1
tae-r.2
for
123062617
tae-r.2
for
123071431
tae-r.2
for
123079772
hvu-r.1
for
123444878
hvu-r.1
for
123444877
hvu-r.1
for
123452312
sbi-r.1
for
8060105
sbi-r.1
for
110431626
bdi-r.1
for
100827967
bdi-r.1
for
100828538
cre-r.1
for
CHLRE_12g552200v5
cre-r.1
for
CHLRE_07g336950v5


Ortholog ID: 1507
Species cit cit ath ath bra bra bra ghi ghi ghi bna bna bna gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi cre cre
Symbol LOC102606996 LOC102625638 PHS1 PHS2 LOC103873279 LOC103875081 LOC103854138 LOC107905809 LOC107893924 LOC107892378 LOC106347565 LOC106371101 LOC106410260 LOC100789789 LOC100779066 LOC100807501 LOC100245621 LOC100257811 LOC100251865 LOC7463047 LOC7481498 LOC18097490 LOC25480821 LOC11443309 LOC25490769 LOC101261874 LOC101244113 LOC101248295 STP-1 LOC102578187 LOC102577532 LOC107771409 LOC107783249 LOC107810306 LOC4334171 LOC4324810 LOC100285259 pho1 LOC123062617 LOC123079772 LOC123105082 LOC123444878 LOC123444877 LOC123452312 LOC8060105 LOC110431626 LOC100827967 LOC100828538 CHLRE_12g552200v5 CHLRE_07g336950v5
Function* alpha-glucan phosphorylase 2, cytosolic alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic Glycosyl transferase, family 35 alpha-glucan phosphorylase 2 alpha-glucan phosphorylase 2, cytosolic alpha-glucan phosphorylase 1 alpha-glucan phosphorylase 1 glycogen phosphorylase 1 alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic alpha-glucan phosphorylase 1 alpha-glucan phosphorylase 2, cytosolic-like alpha-glucan phosphorylase 1 alpha-glucan phosphorylase 1 alpha-glucan phosphorylase, H isozyme glycogen phosphorylase 1 alpha-glucan phosphorylase, H isozyme alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic alpha-glucan phosphorylase, H isozyme alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic alpha-glucan phosphorylase, H isozyme uncharacterized LOC18097490 alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic glycogen phosphorylase 1 alpha-glucan phosphorylase, H isozyme uncharacterized LOC101261874 alpha-glucan phosphorylase, H isozyme alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic-like glycogen phosphorylase 1-like alpha-glucan phosphorylase type H isozyme alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic uncharacterized LOC107783249 alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic alpha-glucan phosphorylase, H isozyme uncharacterized LOC100285259 starch phosphorylase1 alpha-glucan phosphorylase, H isozyme-like alpha-glucan phosphorylase, H isozyme-like alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic alpha-glucan phosphorylase, H isozyme-like alpha-glucan phosphorylase, H isozyme alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic alpha-glucan phosphorylase, H isozyme alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic alpha-glucan phosphorylase, H isozyme alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 6
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
cit00073 Cutin, suberine and wax biosynthesis 2
cit00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 5
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 9
ath00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 3
bra04517 IgSF CAM signaling 3
bra04814 Motor proteins 3
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi04712 Circadian rhythm - plant 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 15
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 12
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 9
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 9
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 5
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 5
vvi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
vvi00195 Photosynthesis 2
vvi00730 Thiamine metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 5
vvi00730 Thiamine metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 6
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 4
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 10
sly00520 Amino sugar and nucleotide sugar metabolism 3
sly01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00730 Thiamine metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 4
sot00730 Thiamine metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 11
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 6
nta04142 Lysosome 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 3
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 9
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00460 Cyanoamino acid metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 11
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 7
zma01240 Biosynthesis of cofactors 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00052 Galactose metabolism 2
zma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 10
zma00260 Glycine, serine and threonine metabolism 2
zma00261 Monobactam biosynthesis 2
zma00270 Cysteine and methionine metabolism 2
zma00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 11
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
tae00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 19
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 4
hvu00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 13
sbi00520 Amino sugar and nucleotide sugar metabolism 3
sbi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 7
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre01230 Biosynthesis of amino acids 4
cre00500 Starch and sucrose metabolism 4
cre00030 Pentose phosphate pathway 4
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre00500 Starch and sucrose metabolism 5
cre01230 Biosynthesis of amino acids 4
cre00030 Pentose phosphate pathway 4
cre00010 Glycolysis / Gluconeogenesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102606996 102625638 822590 823850 103873279 103875081 103854138 107905809 107893924 107892378 106347565 106371101 106410260 100789789 100779066 100807501 100245621 100257811 100251865 7463047 7481498 18097490 25480821 11443309 25490769 101261874 101244113 101248295 102603391 102578187 102577532 107771409 107783249 107810306 4334171 4324810 100285259 100170240 123062617 123079772 123105082 123444878 123444877 123452312 8060105 110431626 100827967 100828538 5719681 5725629
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