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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102607084   uncharacterized LOC102607084 
 ath-u.5   AT5G08139   RING/U-box superfamily protein 
 ath-u.5   AT5G60820   RING/U-box superfamily protein 
 bra-r.6   103847578   E3 ubiquitin-protein ligase CIP8 
 bra-r.6   103855760   E3 ubiquitin-protein ligase CIP8 
 ghi-r.1   107949757   uncharacterized LOC107949757 
 ghi-r.1   107949760   uncharacterized LOC107949760 
 ghi-r.1   107887071   uncharacterized LOC107887071 
 bna-r.1   125584051   E3 ubiquitin-protein ligase CIP8-like 
 bna-r.1   106434617   uncharacterized LOC106434617 
 bna-r.1   106433886   E3 ubiquitin-protein ligase CIP8-like 
 gma-u.5   100814798   E3 ubiquitin-protein ligase CIP8 
 gma-u.5   100812037   E3 ubiquitin-protein ligase CIP8 
 gma-u.5   100794303   E3 ubiquitin-protein ligase CIP8 
 vvi-u.5   100268065   uncharacterized LOC100268065 
 vvi-u.5   104881617   E3 ubiquitin ligase BIG BROTHER-related 
 ppo-u.5   7453865   E3 ubiquitin-protein ligase CIP8 
 ppo-u.5   7487122   uncharacterized LOC7487122 
 mtr-u.5   25495490   E3 ubiquitin-protein ligase CIP8 
 mtr-u.5   25493924   uncharacterized LOC25493924 
 sly-u.5   101254448   E3 ubiquitin-protein ligase CIP8 
 sly-u.5   101264712   uncharacterized LOC101264712 
 sly-u.5   101246882   E3 ubiquitin-protein ligase CIP8-like 
 sot-r.1   102596873   E3 ubiquitin-protein ligase Praja-2-like 
 sot-r.1   102594265   E3 ubiquitin-protein ligase RNF181 
 sot-r.1   102578405   uncharacterized LOC102578405 
 nta-r.1   107820399   uncharacterized LOC107820399 
 nta-r.1   107814792   uncharacterized LOC107814792 
 nta-r.1   107795337   uncharacterized LOC107795337 
 osa-u.5   9268797   E3 ubiquitin-protein ligase CIP8 
 zma-u.5   100217052   putative RING zinc finger domain superfamily protein 
 tae-r.2   123141735   E3 ubiquitin-protein ligase CIP8 
 tae-r.2   123134459   E3 ubiquitin-protein ligase CIP8 
 hvu-r.1   123402340   E3 ubiquitin ligase BIG BROTHER-related-like 
 sbi-r.1   8071742   E3 ubiquitin-protein ligase CIP8 
 bdi-r.1   100832254   E3 ubiquitin-protein ligase CIP8 

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Top 50 coexpressed genes to 102607084 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102607084 (cit-r.1 coexpression data)

CoexMap"102607084"


citLOC102607084 | Entrez gene ID : 102607084    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 2 3 3 3 2 2 2 3 3 3 1 1 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (265 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4272 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (137 genes)  IEA  
Protein XP_006485723.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_006485723.2)
Subcellular
localization
TargetP
other 8  (predict for XP_006485723.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102607084
ath-u.5
for
AT5G08139
ath-u.5
for
AT5G60820
bra-r.6
for
103847578
bra-r.6
for
103855760
ghi-r.1
for
107949757
ghi-r.1
for
107949760
ghi-r.1
for
107887071
bna-r.1
for
125584051
bna-r.1
for
106434617
bna-r.1
for
106433886
gma-u.5
for
100814798
gma-u.5
for
100812037
gma-u.5
for
100794303
vvi-u.5
for
100268065
vvi-u.5
for
104881617
ppo-u.5
for
7453865
ppo-u.5
for
7487122
mtr-u.5
for
25495490
mtr-u.5
for
25493924
sly-u.5
for
101254448
sly-u.5
for
101264712
sly-u.5
for
101246882
sot-r.1
for
102596873
sot-r.1
for
102594265
sot-r.1
for
102578405
nta-r.1
for
107820399
nta-r.1
for
107814792
nta-r.1
for
107795337
osa-u.5
for
9268797
zma-u.5
for
100217052
tae-r.2
for
123141735
tae-r.2
for
123134459
hvu-r.1
for
123402340
sbi-r.1
for
8071742
bdi-r.1
for
100832254


Ortholog ID: 4435
Species cit ath ath bra bra ghi ghi ghi bna bna bna gma gma gma vvi vvi ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa zma tae tae hvu sbi bdi
Symbol LOC102607084 AT5G08139 AT5G60820 LOC103855760 LOC103860540 LOC107949757 LOC107949760 LOC107893776 LOC106434617 LOC106377267 LOC106419504 LOC100812037 LOC100794303 LOC100789524 LOC100268065 LOC104881617 LOC7453865 LOC7487122 LOC25495490 LOC25493924 LOC101254448 LOC101264712 LOC101246882 LOC102596873 LOC102594265 LOC102578405 LOC107820399 LOC107814792 LOC107795337 LOC9268797 LOC100217052 LOC123141735 LOC123134459 LOC123402340 LOC8071742 LOC100832254
Function* uncharacterized LOC102607084 RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase CIP8 uncharacterized LOC103860540 uncharacterized LOC107949757 uncharacterized LOC107949760 E3 ubiquitin-protein ligase CIP8 uncharacterized LOC106434617 uncharacterized LOC106377267 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase Praja-2 uncharacterized LOC100268065 E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin-protein ligase CIP8 uncharacterized LOC7487122 E3 ubiquitin-protein ligase CIP8 uncharacterized LOC25493924 E3 ubiquitin-protein ligase CIP8 uncharacterized LOC101264712 E3 ubiquitin-protein ligase CIP8-like E3 ubiquitin-protein ligase Praja-2-like E3 ubiquitin-protein ligase RNF181 uncharacterized LOC102578405 uncharacterized LOC107820399 uncharacterized LOC107814792 uncharacterized LOC107795337 E3 ubiquitin-protein ligase CIP8 putative RING zinc finger domain superfamily protein E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin ligase BIG BROTHER-related-like E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00920 Sulfur metabolism 2
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03083 Polycomb repressive complex 2
vvi04712 Circadian rhythm - plant 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 3
osa01310 Nitrogen cycle 3
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 3
sbi04145 Phagosome 3
sbi04517 IgSF CAM signaling 3
sbi04814 Motor proteins 3
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 3
bdi00053 Ascorbate and aldarate metabolism 2
bdi01240 Biosynthesis of cofactors 2
bdi01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102607084 830709 836203 103855760 103860540 107949757 107949760 107893776 106434617 106377267 106419504 100812037 100794303 100789524 100268065 104881617 7453865 7487122 25495490 25493924 101254448 101264712 101246882 102596873 102594265 102578405 107820399 107814792 107795337 9268797 100217052 123141735 123134459 123402340 8071742 100832254
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