ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cit-r.1	102607875	protein Brevis radix-like 2
cit-r.1	102610534	protein Brevis radix-like 4
ath-u.5	ATBRXL2	DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein
ath-u.5	BRXL4	BREVIS RADIX-like 4
ath-u.5	BRX-LIKE3	BREVIS RADIX-like 3
bra-r.6	103851355	protein Brevis radix-like 4
bra-r.6	103842396	protein Brevis radix-like 2
bra-r.6	103871065	protein Brevis radix-like 3
ghi-r.1	107897705	protein Brevis radix-like 4
ghi-r.1	107901081	protein Brevis radix-like 4
ghi-r.1	107904325	protein Brevis radix-like 2
bna-r.1	106434831	protein Brevis radix-like 4
bna-r.1	111206306	protein Brevis radix-like 2
bna-r.1	106348643	protein Brevis radix-like 2
gma-u.5	100777018	protein Brevis radix-like 4
gma-u.5	100791360	protein Brevis radix-like 4
gma-u.5	100793326	protein Brevis radix-like 4
vvi-u.5	100251503	protein Brevis radix-like 2
vvi-u.5	100250851	protein Brevis radix-like 4
ppo-u.5	7490953	protein Brevis radix-like 2
ppo-u.5	7475705	protein Brevis radix-like 2
ppo-u.5	7490521	protein Brevis radix-like 4
mtr-u.5	25486472	protein Brevis radix-like 4
mtr-u.5	25500535	protein Brevis radix-like 2
sly-u.5	101267614	protein Brevis radix-like 2
sly-u.5	101249105	protein Brevis radix-like 4
sot-r.1	102598241	protein Brevis radix-like 4
sot-r.1	102593511	protein Brevis radix-like 2
nta-r.1	107764900	protein Brevis radix-like 2
nta-r.1	107778947	protein Brevis radix-like 4
nta-r.1	107820029	protein Brevis radix-like 4
osa-u.5	9266134	protein Brevis radix-like 1
osa-u.5	4345773	protein Brevis radix-like 1
zma-u.5	103632829	protein Brevis radix-like 1
zma-u.5	100283052	water channel
zma-u.5	100275355	uncharacterized LOC100275355
tae-r.2	123121494	protein Brevis radix-like 1
tae-r.2	123103716	protein Brevis radix-like 1
tae-r.2	123111937	protein Brevis radix-like 1
hvu-r.1	123396558	protein Brevis radix-like 1
sbi-r.1	8080652	protein Brevis radix-like 1
sbi-r.1	8062755	protein Brevis radix-like 1
bdi-r.1	100825431	protein Brevis radix-like 1
bdi-r.1	100835582	protein Brevis radix-like 1

Top 50 coexpressed genes to 102607875 (cit-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102607875 (cit-r.1 coexpression data)

CoexMap"102607875"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_006465942.2 [sequence] [blastp]
XP_006465944.2 [sequence] [blastp]
XP_006465946.2 [sequence] [blastp]
XP_024949420.2 [sequence] [blastp]
XP_052300229.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, pero 2, chlo 1, extr 1	(predict for XP_006465942.2)
nucl 5, pero 2, chlo 1, extr 1	(predict for XP_006465944.2)
nucl 9, cyto_nucl 5	(predict for XP_006465946.2)
nucl 5, pero 2, chlo 1, extr 1	(predict for XP_024949420.2)
nucl 5, pero 2, chlo 1, extr 1	(predict for XP_052300229.1)

Subcellular
localization
TargetP

mito 4, other 3	(predict for XP_006465942.2)
mito 4, other 3	(predict for XP_006465944.2)
chlo 4, mito 3	(predict for XP_006465946.2)
mito 4, other 3	(predict for XP_024949420.2)
mito 4, other 3	(predict for XP_052300229.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102607875	cit-r.1 for 102610534	ath-u.5 for ATBRXL2	ath-u.5 for BRXL4	ath-u.5 for BRX-LIKE3	bra-r.6 for 103851355	bra-r.6 for 103842396	bra-r.6 for 103871065	ghi-r.1 for 107897705	ghi-r.1 for 107901081	ghi-r.1 for 107904325	bna-r.1 for 106434831	bna-r.1 for 111206306	bna-r.1 for 106348643	gma-u.5 for 100777018	gma-u.5 for 100791360	gma-u.5 for 100793326	vvi-u.5 for 100251503	vvi-u.5 for 100250851	ppo-u.5 for 7490953	ppo-u.5 for 7475705	ppo-u.5 for 7490521	mtr-u.5 for 25486472	mtr-u.5 for 25500535	sly-u.5 for 101267614	sly-u.5 for 101249105	sot-r.1 for 102598241	sot-r.1 for 102593511	nta-r.1 for 107764900	nta-r.1 for 107778947	nta-r.1 for 107820029	osa-u.5 for 9266134	osa-u.5 for 4345773	zma-u.5 for 103632829	zma-u.5 for 100283052	zma-u.5 for 100275355	tae-r.2 for 123121494	tae-r.2 for 123103716	tae-r.2 for 123111937	hvu-r.1 for 123396558	sbi-r.1 for 8080652	sbi-r.1 for 8062755	bdi-r.1 for 100825431	bdi-r.1 for 100835582

Ortholog

Ortholog ID: 2278

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC102607875

LOC102610534

ATBRXL2

BRXL4

Function^*

protein Brevis radix-like 2

protein Brevis radix-like 4

DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein

BREVIS RADIX-like 4

BREVIS RADIX-like 3

protein Brevis radix-like 4

protein Brevis radix-like 3

protein Brevis radix-like 4

protein Brevis radix-like 2

protein Brevis radix-like 4

protein Brevis radix-like 2

protein Brevis radix-like 4

protein Brevis radix-like 2

protein Brevis radix-like 4

protein Brevis radix-like 2

protein Brevis radix-like 4

protein Brevis radix-like 2

protein Brevis radix-like 4

protein Brevis radix-like 2

protein Brevis radix-like 4

protein Brevis radix-like 1

water channel

uncharacterized LOC100275355

protein Brevis radix-like 1

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04517	IgSF CAM signaling	2
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi04517	IgSF CAM signaling	2
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00040	Pentose and glucuronate interconversions	2
gma00908	Zeatin biosynthesis	2
gma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	4
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	6
nta00620	Pyruvate metabolism	6
nta01200	Carbon metabolism	6
nta01230	Biosynthesis of amino acids	6
nta04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	3
zma01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	9
tae04517	IgSF CAM signaling	9
tae04814	Motor proteins	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	3
tae04517	IgSF CAM signaling	3
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	6
tae04517	IgSF CAM signaling	6
tae04814	Motor proteins	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	2
hvu04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

102607875

102610534

820614

832176

841858

103851355

103871065

103856450

107904325

107906076

107907113

106434831

106387002

106452257

100777018

100791360

100801626

100251503

100250851

7490953

7490521

7497592

25486472

25500535

101267614

101249105

102598241

102593511

107764900

107778947

107820029

9266134

4345773

103632829

100283052

100275355

123121494

123103716

123111937

123396558

8080652

8062755

100825431

100835582

The preparation time of this page was 0.7 [sec].


Species	cit	ath	bra	ghi	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	3	3	3	3	3	2	3	2	2	2	3	2	3	3	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102607875 (cit-r.1 coexpression data)

Top 50 enrichment test to 102607875 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**