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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102607998   hypothetical protein 
 cit-r.1   102625727   uncharacterized calcium-binding protein At1g02270-like 
 ath-u.5   AT5G54130   Calcium-binding endonuclease/exonuclease/phosphatase family 
 ath-u.5   AT1G02270   Calcium-binding endonuclease/exonuclease/phosphatase family 
 bra-r.6   103851988   uncharacterized calcium-binding protein At1g02270 
 ghi-r.1   107924737   uncharacterized calcium-binding protein At1g02270 
 ghi-r.1   107938068   uncharacterized calcium-binding protein At1g02270 
 ghi-r.1   107937024   uncharacterized calcium-binding protein At1g02270 
 bna-r.1   106390186   uncharacterized calcium-binding protein At1g02270 
 bna-r.1   111205387   uncharacterized calcium-binding protein At1g02270 
 bna-r.1   106365718   uncharacterized calcium-binding protein At1g02270 
 gma-u.5   100777138   uncharacterized calcium-binding protein At1g02270 
 gma-u.5   100779780   uncharacterized calcium-binding protein At1g02270 
 gma-u.5   100788191   uncharacterized calcium-binding protein At1g02270 
 vvi-u.5   100247268   uncharacterized calcium-binding protein At1g02270 
 vvi-u.5   100260686   uncharacterized calcium-binding protein At1g02270 
 ppo-u.5   18105480   uncharacterized calcium-binding protein At1g02270 
 ppo-u.5   7486816   uncharacterized calcium-binding protein At1g02270 
 ppo-u.5   7487753   uncharacterized calcium-binding protein At1g02270 
 mtr-u.5   25500583   uncharacterized calcium-binding protein At1g02270 
 mtr-u.5   11410878   uncharacterized calcium-binding protein At1g02270 
 mtr-u.5   11421676   uncharacterized calcium-binding protein At1g02270 
 sly-u.5   101253871   uncharacterized calcium-binding protein At1g02270 
 sot-r.1   102594109   uncharacterized calcium-binding protein At1g02270 
 nta-r.1   107791705   putative calcium-binding protein At1g02270 
 nta-r.1   107778748   putative calcium-binding protein At1g02270 
 osa-u.5   4348262   uncharacterized calcium-binding protein At1g02270 
 zma-u.5   100192933   uncharacterized LOC100192933 
 tae-r.2   123042449   uncharacterized calcium-binding protein At1g02270 
 tae-r.2   123180909   uncharacterized calcium-binding protein At1g02270 
 hvu-r.1   123428710   uncharacterized calcium-binding protein At1g02270 
 sbi-r.1   8059661   uncharacterized calcium-binding protein At1g02270 
 bdi-r.1   100840632   uncharacterized calcium-binding protein At1g02270 

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Top 50 coexpressed genes to 102607998 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102607998 (cit-r.1 coexpression data)

CoexMap"102607998"


citLOC102607998 | Entrez gene ID : 102607998      
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 1 3 3 3 2 3 3 1 1 2 1 1 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (30 genes)  IEA  
GO:0005509 [list] [network] calcium ion binding  (209 genes)  IEA  
Protein XP_006491411.1 [sequence] [blastp]
XP_006491412.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1  (predict for XP_006491411.1)
nucl 5,  cyto 3,  cysk_nucl 3  (predict for XP_006491412.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for XP_006491411.1)
chlo 6,  other 4  (predict for XP_006491412.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102607998
cit-r.1
for
102625727
ath-u.5
for
AT5G54130
ath-u.5
for
AT1G02270
bra-r.6
for
103851988
ghi-r.1
for
107924737
ghi-r.1
for
107938068
ghi-r.1
for
107937024
bna-r.1
for
106390186
bna-r.1
for
111205387
bna-r.1
for
106365718
gma-u.5
for
100777138
gma-u.5
for
100779780
gma-u.5
for
100788191
vvi-u.5
for
100247268
vvi-u.5
for
100260686
ppo-u.5
for
18105480
ppo-u.5
for
7486816
ppo-u.5
for
7487753
mtr-u.5
for
25500583
mtr-u.5
for
11410878
mtr-u.5
for
11421676
sly-u.5
for
101253871
sot-r.1
for
102594109
nta-r.1
for
107791705
nta-r.1
for
107778748
osa-u.5
for
4348262
zma-u.5
for
100192933
tae-r.2
for
123042449
tae-r.2
for
123180909
hvu-r.1
for
123428710
sbi-r.1
for
8059661
bdi-r.1
for
100840632


Ortholog ID: 4995
Species cit cit ath ath bra ghi ghi ghi bna bna bna gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC102607998 LOC102625727 AT5G54130 AT1G02270 LOC103851988 LOC107924737 LOC107938068 LOC107937024 LOC106390186 LOC111205387 LOC106365718 LOC100777138 LOC100779780 LOC100247268 LOC100260686 LOC7486816 LOC7487753 LOC7496452 LOC25500583 LOC11410878 LOC11421676 LOC101253871 LOC102594109 LOC107791705 LOC107778748 LOC4348262 LOC100192933 LOC123042449 LOC123180909 LOC123428710 LOC8059661 LOC100840632
Function* hypothetical protein uncharacterized calcium-binding protein At1g02270-like Calcium-binding endonuclease/exonuclease/phosphatase family Calcium-binding endonuclease/exonuclease/phosphatase family uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 putative calcium-binding protein At1g02270 putative calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized LOC100192933 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270 uncharacterized calcium-binding protein At1g02270
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00760 Nicotinate and nicotinamide metabolism 4
ath01240 Biosynthesis of cofactors 3
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath04626 Plant-pathogen interaction 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra03040 Spliceosome 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 3
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 3
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 6
bna00740 Riboflavin metabolism 4
bna00790 Folate biosynthesis 4
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 4
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 6
vvi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
sot00330 Arginine and proline metabolism 2
sot04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta00053 Ascorbate and aldarate metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta00561 Glycerolipid metabolism 2
nta00053 Ascorbate and aldarate metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
tae04016 MAPK signaling pathway - plant 2
tae04070 Phosphatidylinositol signaling system 2
tae04075 Plant hormone signal transduction 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00240 Pyrimidine metabolism 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102607998 102625727 835500 839381 103851988 107924737 107938068 107937024 106390186 111205387 106365718 100777138 100779780 100247268 100260686 7486816 7487753 7496452 25500583 11410878 11421676 101253871 102594109 107791705 107778748 4348262 100192933 123042449 123180909 123428710 8059661 100840632
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