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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102609345   sphingoid long-chain bases kinase 1 
 ath-u.5   LCBK1   long-chain base (LCB) kinase 1 
 bra-r.6   103874220   sphingoid long-chain bases kinase 1 
 bra-r.6   103854897   sphingoid long-chain bases kinase 1 
 ghi-r.1   107949220   sphingoid long-chain bases kinase 1 
 ghi-r.1   107940988   sphingoid long-chain bases kinase 1 
 ghi-r.1   107929797   sphingoid long-chain bases kinase 1 
 bna-r.1   125582019   sphingoid long-chain bases kinase 1 
 bna-r.1   125597791   sphingoid long-chain bases kinase 1 
 bna-r.1   106348330   sphingoid long-chain bases kinase 1 
 gma-u.5   100800104   sphingoid long-chain bases kinase 1 
 gma-u.5   100788629   sphingoid long-chain bases kinase 1 
 vvi-u.5   100245435   sphingoid long-chain bases kinase 1 
 ppo-u.5   7454301   sphingoid long-chain bases kinase 1 
 ppo-u.5   7455507   sphingoid long-chain bases kinase 1 
 mtr-u.5   25495082   sphingoid long-chain bases kinase 1 
 sly-u.5   101267846   sphingoid long-chain bases kinase 1 
 sot-r.1   102585935   sphingoid long-chain bases kinase 1 
 nta-r.1   107775511   sphingoid long-chain bases kinase 1 
 nta-r.1   107822472   sphingoid long-chain bases kinase 1 
 osa-u.5   4349120   sphingoid long-chain bases kinase 1 
 osa-u.5   4336541   sphingoid long-chain bases kinase 1 
 zma-u.5   103643367   sphingoid long-chain bases kinase 1 
 zma-u.5   100192564   uncharacterized LOC100192564 
 zma-u.5   103654350   sphingoid long-chain bases kinase 1 
 tae-r.2   123189946   sphingoid long-chain bases kinase 1 
 tae-r.2   123181336   sphingoid long-chain bases kinase 1 
 tae-r.2   123124510   sphingoid long-chain bases kinase 1 
 hvu-r.1   123434623   sphingoid long-chain bases kinase 1-like 
 hvu-r.1   123427386   sphingoid long-chain bases kinase 1-like 
 sbi-r.1   8065695   sphingoid long-chain bases kinase 1 
 sbi-r.1   8055928   sphingoid long-chain bases kinase 1 
 bdi-r.1   100840129   sphingoid long-chain bases kinase 1 
 bdi-r.1   100825372   sphingoid long-chain bases kinase 1 

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Top 50 coexpressed genes to 102609345 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102609345 (cit-r.1 coexpression data)

CoexMap"102609345"


citLOC102609345 | Entrez gene ID : 102609345    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 2 3 3 2 1 2 1 1 1 2 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0046512 [list] [network] sphingosine biosynthetic process  (8 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (2752 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4272 genes)  IEA  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (4772 genes)  IEA  
GO MF
GO:0016301 [list] [network] kinase activity  (1285 genes)  IEA  
Protein XP_006468670.1 [sequence] [blastp]
XP_052291575.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_006468670.1)
chlo 10  (predict for XP_052291575.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006468670.1)
chlo 9  (predict for XP_052291575.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102609345
ath-u.5
for
LCBK1
bra-r.6
for
103874220
bra-r.6
for
103854897
ghi-r.1
for
107949220
ghi-r.1
for
107940988
ghi-r.1
for
107929797
bna-r.1
for
125582019
bna-r.1
for
125597791
bna-r.1
for
106348330
gma-u.5
for
100800104
gma-u.5
for
100788629
vvi-u.5
for
100245435
ppo-u.5
for
7454301
ppo-u.5
for
7455507
mtr-u.5
for
25495082
sly-u.5
for
101267846
sot-r.1
for
102585935
nta-r.1
for
107775511
nta-r.1
for
107822472
osa-u.5
for
4349120
osa-u.5
for
4336541
zma-u.5
for
103643367
zma-u.5
for
100192564
zma-u.5
for
103654350
tae-r.2
for
123189946
tae-r.2
for
123181336
tae-r.2
for
123124510
hvu-r.1
for
123434623
hvu-r.1
for
123427386
sbi-r.1
for
8065695
sbi-r.1
for
8055928
bdi-r.1
for
100840129
bdi-r.1
for
100825372


Ortholog ID: 4975
Species cit ath bra bra ghi ghi ghi bna bna bna gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC102609345 LCBK1 LOC103874220 LOC103854897 LOC107949220 LOC107940988 LOC107920043 LOC125597791 LOC106348330 LOC106382725 LOC100800104 LOC100788629 LOC100245435 LOC7454301 LOC7455507 LOC25495082 LOC101267846 LOC102585935 LOC107775511 LOC107822472 LOC4349120 LOC4336541 LOC103643367 LOC100192564 LOC103654350 LOC123181336 LOC123124510 LOC123046177 LOC123434623 LOC123427386 LOC8065695 LOC8055928 LOC100840129 LOC100825372
Function* sphingoid long-chain bases kinase 1 long-chain base (LCB) kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 uncharacterized LOC100192564 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1-like sphingoid long-chain bases kinase 1-like sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1 sphingoid long-chain bases kinase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 3
bra04141 Protein processing in endoplasmic reticulum 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04382 Cornified envelope formation 2
bra00561 Glycerolipid metabolism 2
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 4
ppo04144 Endocytosis 4
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04120 Ubiquitin mediated proteolysis 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
sbi04144 Endocytosis 2
sbi05100 Bacterial invasion of epithelial cells 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
bdi04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102609345 832411 103874220 103854897 107949220 107940988 107920043 125597791 106348330 106382725 100800104 100788629 100245435 7454301 7455507 25495082 101267846 102585935 107775511 107822472 4349120 4336541 103643367 100192564 103654350 123181336 123124510 123046177 123434623 123427386 8065695 8055928 100840129 100825372
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