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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102609407   elongator complex protein 5 
 ath-u.5   AT2G18410   elongator complex protein 
 bra-r.6   103828393   elongator complex protein 5 
 ghi-r.1   121203036   elongator complex protein 5 
 ghi-r.1   107935766   elongator complex protein 5 
 bna-r.1   106356166   elongator complex protein 5 
 bna-r.1   106432735   elongator complex protein 5-like 
 gma-u.5   100794562   elongator complex protein 5 
 gma-u.5   100792556   Elongator subcomplex subunit Elp5 
 vvi-u.5   100258368   elongator complex protein 5 
 ppo-u.5   18110001   elongator complex protein 5 
 ppo-u.5   18099485   elongator complex protein 5 
 mtr-u.5   11415575   elongator complex protein 5 
 sly-u.5   101266583   elongator complex protein 5 
 sot-r.1   102590457   elongator complex protein 5 
 nta-r.1   107827990   elongator complex protein 5 
 nta-r.1   107769854   elongator complex protein 5 
 osa-u.5   4331976   elongator complex protein 5 
 zma-u.5   100276830   uncharacterized LOC100276830 
 tae-r.2   123093079   elongator complex protein 5 
 tae-r.2   123098364   elongator complex protein 5 
 tae-r.2   123084984   elongator complex protein 5 
 hvu-r.1   123449403   elongator complex protein 5 
 sbi-r.1   8081874   elongator complex protein 5 
 bdi-r.1   100828128   elongator complex protein 5 

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Top 50 coexpressed genes to 102609407 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102609407 (cit-r.1 coexpression data)

CoexMap"102609407"


citLOC102609407 | Entrez gene ID : 102609407    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 2 2 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002098 [list] [network] tRNA wobble uridine modification  (15 genes)  IEA  
GO CC
GO:0033588 [list] [network] elongator holoenzyme complex  (6 genes)  IEA  
GO:0005829 [list] [network] cytosol  (791 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0000049 [list] [network] tRNA binding  (24 genes)  IEA  
Protein XP_006482241.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_nucl 4,  nucl 3,  chlo 1,  mito 1,  pero 1  (predict for XP_006482241.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006482241.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102609407
ath-u.5
for
AT2G18410
bra-r.6
for
103828393
ghi-r.1
for
121203036
ghi-r.1
for
107935766
bna-r.1
for
106356166
bna-r.1
for
106432735
gma-u.5
for
100794562
gma-u.5
for
100792556
vvi-u.5
for
100258368
ppo-u.5
for
18110001
ppo-u.5
for
18099485
mtr-u.5
for
11415575
sly-u.5
for
101266583
sot-r.1
for
102590457
nta-r.1
for
107827990
nta-r.1
for
107769854
osa-u.5
for
4331976
zma-u.5
for
100276830
tae-r.2
for
123093079
tae-r.2
for
123098364
tae-r.2
for
123084984
hvu-r.1
for
123449403
sbi-r.1
for
8081874
bdi-r.1
for
100828128


Ortholog ID: 9987
Species cit ath bra ghi ghi bna bna gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC102609407 AT2G18410 LOC103828393 LOC121203036 LOC107935766 LOC106356166 LOC106432735 LOC100794562 LOC100792556 LOC100258368 LOC18110001 LOC18099485 LOC11415575 LOC101266583 LOC102590457 LOC107827990 LOC107769854 LOC4331976 LOC100276830 LOC123093079 LOC123098364 LOC123084984 LOC123449403 LOC8081874 LOC100828128
Function* elongator complex protein 5 elongator complex protein elongator complex protein 5 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5-like elongator complex protein 5 Elongator subcomplex subunit Elp5 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5 uncharacterized LOC100276830 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5 elongator complex protein 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 4
cit00520 Amino sugar and nucleotide sugar metabolism 3
cit01250 Biosynthesis of nucleotide sugars 3
cit00053 Ascorbate and aldarate metabolism 2
cit00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
gma01230 Biosynthesis of amino acids 2
gma04148 Efferocytosis 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102609407 816356 103828393 121203036 107935766 106356166 106432735 100794562 100792556 100258368 18110001 18099485 11415575 101266583 102590457 107827990 107769854 4331976 100276830 123093079 123098364 123084984 123449403 8081874 100828128
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