ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cit-r.1	102610938	low-specificity L-threonine aldolase 1-like
ath-u.5	THA2	threonine aldolase 2
ath-u.5	THA1	threonine aldolase 1
gma-u.5	100806463	probable low-specificity L-threonine aldolase 1
gma-u.5	100800811	probable low-specificity L-threonine aldolase 1
gma-u.5	100790890	L-allo-threonine aldolase-like
vvi-u.5	100265578	low-specificity L-threonine aldolase 1
ppo-u.5	7487180	low-specificity L-threonine aldolase 1
mtr-u.5	25499717	probable low-specificity L-threonine aldolase 1
mtr-u.5	11405591	probable low-specificity L-threonine aldolase 1
sly-u.5	101247807	low-specificity L-threonine aldolase 1
osa-u.5	4336402	low-specificity L-threonine aldolase 1
zma-u.5	100282861	L-allo-threonine aldolase
zma-u.5	100274124	putative threonine aldolase family protein
zma-u.5	100272842	putative threonine aldolase family protein

Top 50 coexpressed genes to 102610938 (cit-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102610938 (cit-r.1 coexpression data)

CoexMap"102610938"

[Cytoscape]

Annotation

functional annotation

KEGG

cit00260 [list] [network] Glycine, serine and threonine metabolism (57 genes)

cit01230 [list] [network] Biosynthesis of amino acids (191 genes)

GO BP

GO:0006567 [list] [network] L-threonine catabolic process	(2 genes)	IEA
GO:0006545 [list] [network] glycine biosynthetic process	(7 genes)	IEA

GO CC

GO:0005829 [list] [network] cytosol

(791 genes)

IEA

GO MF

GO:0008732 [list] [network] L-allo-threonine aldolase activity

(1 genes)

IEA

Protein

XP_006487715.2 [sequence] [blastp]
XP_006487716.2 [sequence] [blastp]
XP_006487717.2 [sequence] [blastp]
XP_015388721.2 [sequence] [blastp]
XP_015388723.2 [sequence] [blastp]
XP_052288520.1 [sequence] [blastp]
XP_052288521.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, chlo 1, mito 1, vacu 1, chlo_mito 1	(predict for XP_006487715.2)
cyto 8, chlo 1, mito 1, vacu 1, chlo_mito 1	(predict for XP_006487716.2)
cyto 8, chlo 1, mito 1, vacu 1, chlo_mito 1	(predict for XP_006487717.2)
cyto 8, chlo 1, mito 1, vacu 1, chlo_mito 1	(predict for XP_015388721.2)
cyto 8, chlo 1, mito 1, vacu 1, chlo_mito 1	(predict for XP_015388723.2)
cyto 8, chlo 1, mito 1, vacu 1, chlo_mito 1	(predict for XP_052288520.1)
cyto 8, chlo 1, mito 1, vacu 1, chlo_mito 1	(predict for XP_052288521.1)

Subcellular
localization
TargetP

other 6, mito 3	(predict for XP_006487715.2)
other 6, mito 3	(predict for XP_006487716.2)
other 6, mito 3	(predict for XP_006487717.2)
other 6, mito 3	(predict for XP_015388721.2)
other 6, mito 3	(predict for XP_015388723.2)
other 6, mito 3	(predict for XP_052288520.1)
other 6, mito 3	(predict for XP_052288521.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102610938	ath-u.5 for THA2	ath-u.5 for THA1	gma-u.5 for 100806463	gma-u.5 for 100800811	gma-u.5 for 100790890	vvi-u.5 for 100265578	ppo-u.5 for 7487180	mtr-u.5 for 25499717	mtr-u.5 for 11405591	sly-u.5 for 101247807	osa-u.5 for 4336402	zma-u.5 for 100282861	zma-u.5 for 100274124	zma-u.5 for 100272842

Ortholog

Ortholog ID: 2548

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC102610938

THA1

THA2

Function^*

low-specificity L-threonine aldolase 1-like

threonine aldolase 1

threonine aldolase 2

probable low-specificity L-threonine aldolase 1

low-specificity L-threonine aldolase 1-like

probable low-specificity L-threonine aldolase 2

probable low-specificity L-threonine aldolase 1

low-specificity L-threonine aldolase 1

probable low-specificity L-threonine aldolase 1

low-specificity L-threonine aldolase 1

L-allo-threonine aldolase-related protein

low-specificity L-threonine aldolase 1-like

low-specificity L-threonine aldolase 1

putative threonine aldolase family protein

probable low-specificity L-threonine aldolase 2

probable low-specificity L-threonine aldolase 1

probable low-specificity L-threonine aldolase 2

probable low-specificity L-threonine aldolase 1

probable low-specificity L-threonine aldolase 2

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00280	Valine, leucine and isoleucine degradation	7
ath00250	Alanine, aspartate and glutamate metabolism	4
ath01210	2-Oxocarboxylic acid metabolism	4
ath01230	Biosynthesis of amino acids	3
ath00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00350	Tyrosine metabolism	2
ath04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	4
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00350	Tyrosine metabolism	4
bra00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
bra00360	Phenylalanine metabolism	3
bra04146	Peroxisome	2
bra00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00260	Glycine, serine and threonine metabolism	4
ghi01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2
ghi00941	Flavonoid biosynthesis	2
ghi00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2
ghi00260	Glycine, serine and threonine metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00260	Glycine, serine and threonine metabolism	7
bna01230	Biosynthesis of amino acids	7
bna00270	Cysteine and methionine metabolism	2
bna00450	Selenocompound metabolism	2
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00260	Glycine, serine and threonine metabolism	2
bna01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00230	Purine metabolism	2
gma03460	Fanconi anemia pathway	2
gma00260	Glycine, serine and threonine metabolism	2
gma01230	Biosynthesis of amino acids	2
gma00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	6
gma04016	MAPK signaling pathway - plant	2
gma04626	Plant-pathogen interaction	2
gma00941	Flavonoid biosynthesis	2
gma00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	6
vvi01230	Biosynthesis of amino acids	4
vvi01200	Carbon metabolism	3
vvi00020	Citrate cycle (TCA cycle)	2
vvi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2
ppo03040	Spliceosome	2
ppo00480	Glutathione metabolism	2
ppo00071	Fatty acid degradation	2
ppo01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00280	Valine, leucine and isoleucine degradation	7
mtr01210	2-Oxocarboxylic acid metabolism	4
mtr00640	Propanoate metabolism	3
mtr00785	Lipoic acid metabolism	3
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00240	Pyrimidine metabolism	2
mtr01232	Nucleotide metabolism	2
mtr01240	Biosynthesis of cofactors	2
mtr00260	Glycine, serine and threonine metabolism	2
mtr02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00280	Valine, leucine and isoleucine degradation	5
sly00071	Fatty acid degradation	4
sly00310	Lysine degradation	3
sly01212	Fatty acid metabolism	3
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00260	Glycine, serine and threonine metabolism	3
sot00270	Cysteine and methionine metabolism	3
sot00280	Valine, leucine and isoleucine degradation	3
sot01210	2-Oxocarboxylic acid metabolism	3
sot00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	8
nta00052	Galactose metabolism	4
nta00260	Glycine, serine and threonine metabolism	4
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	8
nta00052	Galactose metabolism	4
nta00260	Glycine, serine and threonine metabolism	4
nta01250	Biosynthesis of nucleotide sugars	3
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00260	Glycine, serine and threonine metabolism	5
zma01230	Biosynthesis of amino acids	4
zma01210	2-Oxocarboxylic acid metabolism	4
zma01200	Carbon metabolism	4
zma00785	Lipoic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01230	Biosynthesis of amino acids	8
tae00260	Glycine, serine and threonine metabolism	6
tae00280	Valine, leucine and isoleucine degradation	6
tae01210	2-Oxocarboxylic acid metabolism	6
tae00640	Propanoate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00260	Glycine, serine and threonine metabolism	4
tae01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	4
sbi00260	Glycine, serine and threonine metabolism	3
sbi01240	Biosynthesis of cofactors	2
sbi00270	Cysteine and methionine metabolism	2
sbi00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00785	Lipoic acid metabolism	2
bdi01200	Carbon metabolism	2
bdi00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04136	Autophagy - other	3

Expression

Expression pattern

Entrez Gene ID^*

102610938

837385

819608

103843388

103871606

107936772

121223477

106383126

125575202

100800811

100806463

100265578

7487180

11405591

25499717

101247807

102577840

107820397

107784859

4336402

100272842

100274124

123041826

123093808

123430695

123449904

110436673

100842610

5728226

The preparation time of this page was 0.1 [sec].


Species	cit	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	bna	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	2	3	1	1	2	1	1	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102610938 (cit-r.1 coexpression data)

Top 50 enrichment test to 102610938 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**