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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102610993   squamosa promoter-binding-like protein 12 
 ghi-r.1   107949771   squamosa promoter-binding-like protein 6 
 ghi-r.1   107887080   squamosa promoter-binding-like protein 6 
 gma-u.5   100777766   squamosa promoter-binding-like protein 16 
 gma-u.5   100812110   teosinte glume architecture 1 
 gma-u.5   100817547   squamosa promoter-binding-like protein 6 
 vvi-u.5   100260293   squamosa promoter-binding-like protein 6 
 ppo-u.5   18105770   squamosa promoter-binding-like protein 18 
 mtr-u.5   25493905   putative squamosa promoter-binding-like protein 19 
 mtr-u.5   25488431   squamosa promoter-binding-like protein 16 
 sly-u.5   101264297   squamosa promoter-binding-like protein 6 
 sly-u.5   101261007   squamosa promoter-binding-like protein 
 sot-r.1   102583706   squamosa promoter-binding-like protein 6 
 sot-r.1   102583877   squamosa promoter-binding-like protein 6 
 nta-r.1   107774760   squamosa promoter-binding-like protein 6 
 nta-r.1   107814567   squamosa promoter-binding-like protein 6 
 nta-r.1   107826867   squamosa promoter-binding-like protein 6 

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Top 50 coexpressed genes to 102610993 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102610993 (cit-r.1 coexpression data)

CoexMap"102610993"


citLOC102610993 | Entrez gene ID : 102610993    
Species cit ghi gma vvi ppo mtr sly sot nta sbi cre ath bra tae zma osa bdi hvu bna
Paralog 1 2 3 1 1 2 2 2 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (1476 genes)  IEA  
Protein XP_006477709.2 [sequence] [blastp]
XP_006477710.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006477709.2)
nucl 10  (predict for XP_006477710.2)
Subcellular
localization
TargetP
other 7  (predict for XP_006477709.2)
other 7  (predict for XP_006477710.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102610993
ghi-r.1
for
107949771
ghi-r.1
for
107887080
gma-u.5
for
100777766
gma-u.5
for
100812110
gma-u.5
for
100817547
vvi-u.5
for
100260293
ppo-u.5
for
18105770
mtr-u.5
for
25493905
mtr-u.5
for
25488431
sly-u.5
for
101264297
sly-u.5
for
101261007
sot-r.1
for
102583706
sot-r.1
for
102583877
nta-r.1
for
107774760
nta-r.1
for
107814567
nta-r.1
for
107826867


Ortholog ID: 12369
Species cit ghi ghi gma gma gma vvi ppo mtr mtr sly sly sot sot nta nta nta
Symbol LOC102610993 LOC107949771 LOC107887080 LOC100777766 LOC100812110 LOC100817547 LOC100260293 LOC18105770 LOC25493905 LOC25488431 LOC101264297 LOC101261007 LOC102583706 LOC102583877 LOC107774760 LOC107814567 LOC107770932
Function* squamosa promoter-binding-like protein 12 squamosa promoter-binding-like protein 6 squamosa promoter-binding-like protein 6 squamosa promoter-binding-like protein 16 teosinte glume architecture 1 squamosa promoter-binding-like protein 6 squamosa promoter-binding-like protein 6 squamosa promoter-binding-like protein 18 putative squamosa promoter-binding-like protein 19 squamosa promoter-binding-like protein 16 squamosa promoter-binding-like protein 6 squamosa promoter-binding-like protein squamosa promoter-binding-like protein 6 squamosa promoter-binding-like protein 6 squamosa promoter-binding-like protein 6 squamosa promoter-binding-like protein 6 squamosa promoter-binding-like protein 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 7
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma02010 ABC transporters 2
gma04981 Folate transport and metabolism 2
gma00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
sly00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 5
nta00941 Flavonoid biosynthesis 5
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102610993 107949771 107887080 100777766 100812110 100817547 100260293 18105770 25493905 25488431 101264297 101261007 102583706 102583877 107774760 107814567 107770932
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