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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102612047   choline monooxygenase, chloroplastic 
 ath-u.5   AT4G29890   choline monooxygenase, putative (CMO-like) 
 gma-u.5   100785909   choline monooxygenase, chloroplastic 
 vvi-u.5   100256530   choline monooxygenase, chloroplastic 
 ppo-u.5   7485492   choline monooxygenase, chloroplastic 
 mtr-u.5   11421939   choline monooxygenase, chloroplastic 
 sly-u.5   101249833   choline monooxygenase, chloroplastic-like 
 osa-u.5   9272377   choline monooxygenase, chloroplastic 
 zma-u.5   778432   CMO protein 

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Top 50 coexpressed genes to 102612047 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102612047 (cit-r.1 coexpression data)

CoexMap"102612047"


citLOC102612047 | Entrez gene ID : 102612047    
Species cit ath gma vvi ppo mtr sly osa zma hvu bna bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00260 [list] [network] Glycine, serine and threonine metabolism (57 genes)
cit00670 [list] [network] One carbon pool by folate (31 genes)
GO BP
GO CC
GO MF
GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding  (36 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (362 genes)  IEA  
Protein XP_024953538.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  extr 1  (predict for XP_024953538.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_024953538.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102612047
ath-u.5
for
AT4G29890
gma-u.5
for
100785909
vvi-u.5
for
100256530
ppo-u.5
for
7485492
mtr-u.5
for
11421939
sly-u.5
for
101249833
osa-u.5
for
9272377
zma-u.5
for
778432


Ortholog ID: 10891
Species cit ath bra ghi ghi gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC102612047 AT4G29890 LOC103861915 LOC107904302 LOC107931614 LOC100785909 LOC100256530 LOC7485492 LOC11421939 LOC101249833 LOC102597733 LOC107784251 LOC107826106 LOC9272377 LOC778432 LOC123160696 LOC123167890 LOC123411537 LOC8063819 LOC100839185
Function* choline monooxygenase, chloroplastic choline monooxygenase, putative (CMO-like) choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic-like choline monooxygenase, chloroplastic-like choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic CMO protein choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic choline monooxygenase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 3
ghi00670 One carbon pool by folate 3
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 3
ghi00670 One carbon pool by folate 3
ghi04136 Autophagy - other 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03013 Nucleocytoplasmic transport 2
ppo03040 Spliceosome 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00670 One carbon pool by folate 2
nta00531 Glycosaminoglycan degradation 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 5
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
tae04517 IgSF CAM signaling 3
tae04518 Integrin signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 5
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 4
bdi00640 Propanoate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102612047 829111 103861915 107904302 107931614 100785909 100256530 7485492 11421939 101249833 102597733 107784251 107826106 9272377 778432 123160696 123167890 123411537 8063819 100839185
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