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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102612285   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 ath-u.5   AT5G51110   Transcriptional coactivator/pterin dehydratase 
 bra-r.6   103857201   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 ghi-r.1   107937988   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 ghi-r.1   107953604   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 bna-r.1   106345871   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 bna-r.1   BNAC03G16100D   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 gma-u.5   100815328   RuBisCO assembly factor 2-like 
 gma-u.5   100813755   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 vvi-u.5   100244293   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 ppo-u.5   18103840   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 ppo-u.5   7457592   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 mtr-u.5   25483198   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 sly-u.5   101265812   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 sot-r.1   102595361   putative pterin-4-alpha-carbinolamine dehydratase 
 nta-r.1   107819572   putative pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 nta-r.1   107832828   putative pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 zma-u.5   109941386   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 zma-u.5   100277322   rubisco accumulation factor2 
 tae-r.2   123106148   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 tae-r.2   123099184   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 tae-r.2   123093987   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 hvu-r.1   123450080   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 sbi-r.1   8079700   uncharacterized LOC8079700 
 bdi-r.1   100822169   probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic 
 cre-r.1   CHLRE_01g049000v5   uncharacterized protein 

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Top 50 coexpressed genes to 102612285 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102612285 (cit-r.1 coexpression data)

CoexMap"102612285"


citLOC102612285 | Entrez gene ID : 102612285    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi cre osa
Paralog 1 1 1 2 2 2 1 2 1 1 1 2 2 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006729 [list] [network] tetrahydrobiopterin biosynthetic process  (3 genes)  IEA  
GO CC
GO:0009536 [list] [network] plastid  (540 genes)  IEA  
GO MF
GO:0008124 [list] [network] 4-alpha-hydroxytetrahydrobiopterin dehydratase activity  (2 genes)  IEA  
Protein XP_006485041.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  plas 1,  cysk_nucl 1,  cyto_plas 1  (predict for XP_006485041.1)
Subcellular
localization
TargetP
mito 4,  other 4  (predict for XP_006485041.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102612285
ath-u.5
for
AT5G51110
bra-r.6
for
103857201
ghi-r.1
for
107937988
ghi-r.1
for
107953604
bna-r.1
for
106345871
bna-r.1
for
BNAC03G16100D
gma-u.5
for
100815328
gma-u.5
for
100813755
vvi-u.5
for
100244293
ppo-u.5
for
18103840
ppo-u.5
for
7457592
mtr-u.5
for
25483198
sly-u.5
for
101265812
sot-r.1
for
102595361
nta-r.1
for
107819572
nta-r.1
for
107832828
zma-u.5
for
109941386
zma-u.5
for
100277322
tae-r.2
for
123106148
tae-r.2
for
123099184
tae-r.2
for
123093987
hvu-r.1
for
123450080
sbi-r.1
for
8079700
bdi-r.1
for
100822169
cre-r.1
for
CHLRE_01g049000v5


Ortholog ID: 8649
Species cit ath bra ghi ghi bna bna gma gma vvi ppo ppo mtr sly sot nta nta zma zma tae tae tae hvu sbi bdi cre
Symbol LOC102612285 AT5G51110 LOC103857201 LOC107937988 LOC107953604 LOC106345871 BNAC03G16100D LOC100815328 LOC100813755 LOC100244293 LOC18103840 LOC7457592 LOC25483198 LOC101265812 LOC102595361 LOC107819572 LOC107832828 LOC109941386 LOC100277322 LOC123106148 LOC123099184 LOC123093987 LOC123450080 LOC8079700 LOC100822169 CHLRE_01g049000v5
Function* probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic Transcriptional coactivator/pterin dehydratase probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic RuBisCO assembly factor 2-like probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic putative pterin-4-alpha-carbinolamine dehydratase putative pterin-4-alpha-carbinolamine dehydratase, chloroplastic putative pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic rubisco accumulation factor2 probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic uncharacterized LOC8079700 probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 2
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00790 Folate biosynthesis 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00710 Carbon fixation by Calvin cycle 10
bna01200 Carbon metabolism 10
bna00195 Photosynthesis 3
bna00630 Glyoxylate and dicarboxylate metabolism 3
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00710 Carbon fixation by Calvin cycle 9
bna01200 Carbon metabolism 9
bna00195 Photosynthesis 3
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 8
gma00710 Carbon fixation by Calvin cycle 5
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00710 Carbon fixation by Calvin cycle 3
sot01200 Carbon metabolism 3
sot01230 Biosynthesis of amino acids 3
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta00270 Cysteine and methionine metabolism 3
nta00790 Folate biosynthesis 2
nta00230 Purine metabolism 2
nta00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta00270 Cysteine and methionine metabolism 4
nta00020 Citrate cycle (TCA cycle) 2
nta00566 Sulfoquinovose metabolism 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 5
tae00030 Pentose phosphate pathway 5
tae00051 Fructose and mannose metabolism 5
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 8
sbi00710 Carbon fixation by Calvin cycle 3
sbi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 10
cre03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102612285 835185 103857201 107937988 107953604 106345871 106387916 100815328 100813755 100244293 18103840 7457592 25483198 101265812 102595361 107819572 107832828 109941386 100277322 123106148 123099184 123093987 123450080 8079700 100822169 5715714
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