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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102612419   30S ribosomal protein S9, mitochondrial 
 ath-u.5   AT3G49080   Ribosomal protein S5 domain 2-like superfamily protein 
 gma-u.5   100797241   30S ribosomal protein S9, mitochondrial 
 gma-u.5   100796918   28S ribosomal protein S9, mitochondrial-like 
 vvi-u.5   100246720   28S ribosomal protein S9, mitochondrial-like 
 ppo-u.5   7484368   30S ribosomal protein S9, mitochondrial 
 mtr-u.5   25489557   30S ribosomal protein S9, mitochondrial 
 sly-u.5   101256335   small ribosomal subunit protein uS9m 
 osa-u.5   4344162   small ribosomal subunit protein uS9m 
 zma-u.5   103643027   30S ribosomal protein S9, chloroplastic 

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Top 50 coexpressed genes to 102612419 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102612419 (cit-r.1 coexpression data)

CoexMap"102612419"


citLOC102612419 | Entrez gene ID : 102612419    
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03010 [list] [network] Ribosome (798 genes)
GO BP
GO:0006412 [list] [network] translation  (405 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (61 genes)  IEA  
GO:0005840 [list] [network] ribosome  (289 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (284 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
Protein XP_006490665.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1  (predict for XP_006490665.1)
Subcellular
localization
TargetP
mito 6,  chlo 5  (predict for XP_006490665.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102612419
ath-u.5
for
AT3G49080
gma-u.5
for
100797241
gma-u.5
for
100796918
vvi-u.5
for
100246720
ppo-u.5
for
7484368
mtr-u.5
for
25489557
sly-u.5
for
101256335
osa-u.5
for
4344162
zma-u.5
for
103643027


Ortholog ID: 10814
Species cit ath bra ghi ghi bna bna gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi cre
Symbol LOC102612419 AT3G49080 LOC103873089 LOC107891244 LOC107889490 LOC106444910 LOC106347442 LOC100797241 LOC100796918 LOC100246720 LOC7484368 LOC25489557 LOC101256335 LOC102587067 LOC107817791 LOC107790845 LOC4344162 LOC103643027 LOC123043880 LOC123187665 LOC123424927 LOC8072244 CHLRE_02g106750v5
Function* 30S ribosomal protein S9, mitochondrial Ribosomal protein S5 domain 2-like superfamily protein 30S ribosomal protein S9, mitochondrial 30S ribosomal protein S9, mitochondrial 30S ribosomal protein S9, mitochondrial 30S ribosomal protein S9, mitochondrial 30S ribosomal protein S9, mitochondrial 30S ribosomal protein S9, mitochondrial 28S ribosomal protein S9, mitochondrial-like 28S ribosomal protein S9, mitochondrial-like 30S ribosomal protein S9, mitochondrial 30S ribosomal protein S9, mitochondrial small ribosomal subunit protein uS9m 37S ribosomal protein S9, mitochondrial small ribosomal subunit protein uS9m small ribosomal subunit protein uS9m small ribosomal subunit protein uS9m 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, mitochondrial 30S ribosomal protein S9, mitochondrial 30S ribosomal protein S9, mitochondrial uncharacterized LOC8072244 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi04626 Plant-pathogen interaction 2
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi04626 Plant-pathogen interaction 2
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03015 mRNA surveillance pathway 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 10
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102612419 824070 103873089 107891244 107889490 106444910 106347442 100797241 100796918 100246720 7484368 25489557 101256335 102587067 107817791 107790845 4344162 103643027 123043880 123187665 123424927 8072244 5725296
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