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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102613193   probable helicase CHR10 
 ath-u.5   ASG3   SNF2 domain-containing protein / helicase domain-containing protein 
 bra-r.6   103866853   probable helicase CHR10 
 ghi-r.1   107900822   probable helicase CHR10 
 bna-r.1   111215516   probable helicase CHR10 
 bna-r.1   106396276   probable helicase CHR10 
 gma-u.5   100797182   probable helicase CHR10 
 vvi-u.5   100247895   probable helicase CHR10 
 ppo-u.5   18105149   probable helicase CHR10 
 mtr-u.5   25498119   probable helicase CHR10 
 mtr-u.5   25498084   probable helicase CHR10 
 sly-u.5   101263936   probable helicase CHR10 
 sot-r.1   102587912   chromodomain-helicase-DNA-binding protein 1-like 
 nta-r.1   107781263   putative helicase CHR10 
 nta-r.1   107824988   putative helicase CHR10 
 osa-u.5   4331290   probable helicase CHR10 
 zma-u.5   103639629   probable helicase CHR10 
 tae-r.2   123106116   probable helicase CHR10 
 tae-r.2   123099150   probable helicase CHR10 
 tae-r.2   123093938   probable helicase CHR10 
 hvu-r.1   123449998   probable helicase CHR10 
 sbi-r.1   8059538   probable helicase CHR10 
 bdi-r.1   100839485   probable helicase CHR10 

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Top 50 coexpressed genes to 102613193 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102613193 (cit-r.1 coexpression data)

CoexMap"102613193"


citLOC102613193 | Entrez gene ID : 102613193    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 1 2 1 1 1 2 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (89 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (225 genes)  IEA  
GO CC
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (33 genes)  IEA  
GO:0003678 [list] [network] DNA helicase activity  (37 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1864 genes)  IEA  
Protein XP_024957068.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 1  (predict for XP_024957068.2)
Subcellular
localization
TargetP
other 8  (predict for XP_024957068.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102613193
ath-u.5
for
ASG3
bra-r.6
for
103866853
ghi-r.1
for
107900822
bna-r.1
for
111215516
bna-r.1
for
106396276
gma-u.5
for
100797182
vvi-u.5
for
100247895
ppo-u.5
for
18105149
mtr-u.5
for
25498119
mtr-u.5
for
25498084
sly-u.5
for
101263936
sot-r.1
for
102587912
nta-r.1
for
107781263
nta-r.1
for
107824988
osa-u.5
for
4331290
zma-u.5
for
103639629
tae-r.2
for
123106116
tae-r.2
for
123099150
tae-r.2
for
123093938
hvu-r.1
for
123449998
sbi-r.1
for
8059538
bdi-r.1
for
100839485


Ortholog ID: 11279
Species cit ath bra ghi bna bna gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC102613193 ASG3 LOC103866853 LOC107900822 LOC111215516 LOC106396276 LOC100797182 LOC100247895 LOC18105149 LOC25498119 LOC25498084 LOC101263936 LOC102587912 LOC107781263 LOC107824988 LOC4331290 LOC103639629 LOC123106116 LOC123099150 LOC123093938 LOC123449998 LOC8059538 LOC100839485
Function* probable helicase CHR10 SNF2 domain-containing protein / helicase domain-containing protein probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 chromodomain-helicase-DNA-binding protein 1-like putative helicase CHR10 putative helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10 probable helicase CHR10
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03410 Base excision repair 5
ath03440 Homologous recombination 4
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 10
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03430 Mismatch repair 6
vvi03030 DNA replication 5
vvi03420 Nucleotide excision repair 5
vvi03410 Base excision repair 4
vvi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 4
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 4
nta03410 Base excision repair 4
nta03420 Nucleotide excision repair 4
nta03430 Mismatch repair 4
nta03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 7
tae03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 5
tae03440 Homologous recombination 3
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 7
tae03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102613193 819106 103866853 107900822 111215516 106396276 100797182 100247895 18105149 25498119 25498084 101263936 102587912 107781263 107824988 4331290 103639629 123106116 123099150 123093938 123449998 8059538 100839485
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