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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102615965   pentatricopeptide repeat-containing protein At3g26630, chloroplastic 
 ath-u.5   AT3G26630   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100789790   pentatricopeptide repeat-containing protein At3g26630, chloroplastic 
 gma-u.5   100807868   pentatricopeptide repeat-containing protein At3g26630, chloroplastic 
 mtr-u.5   11439015   pentatricopeptide repeat-containing protein At3g26630, chloroplastic 

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Top 50 coexpressed genes to 102615965 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102615965 (cit-r.1 coexpression data)

CoexMap"102615965"


citLOC102615965 | Entrez gene ID : 102615965    
Species cit ath gma mtr bdi hvu bra vvi bna ppo sbi sly ghi osa sot nta cre tae zma
Paralog 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_052291051.1 [sequence] [blastp]
XP_052291052.1 [sequence] [blastp]
XP_052291053.1 [sequence] [blastp]
XP_052291054.1 [sequence] [blastp]
XP_052291055.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 1  (predict for XP_052291051.1)
chlo 8,  cyto 1  (predict for XP_052291052.1)
chlo 8,  cyto 1  (predict for XP_052291053.1)
chlo 8,  cyto 1  (predict for XP_052291054.1)
cyto 6,  chlo 2,  mito 1,  plas 1,  mito_plas 1  (predict for XP_052291055.1)
Subcellular
localization
TargetP
other 7  (predict for XP_052291051.1)
other 7  (predict for XP_052291052.1)
other 7  (predict for XP_052291053.1)
other 7  (predict for XP_052291054.1)
mito 5  (predict for XP_052291055.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102615965
ath-u.5
for
AT3G26630
gma-u.5
for
100789790
gma-u.5
for
100807868
mtr-u.5
for
11439015


Ortholog ID: 15830
Species cit ath bra bna bna gma gma mtr
Symbol LOC102615965 AT3G26630 LOC103875285 LOC111198750 LOC106409663 LOC100789790 LOC100807868 LOC11439015
Function* pentatricopeptide repeat-containing protein At3g26630, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g26630, chloroplastic pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like pentatricopeptide repeat-containing protein At3g26630, chloroplastic pentatricopeptide repeat-containing protein At3g26630, chloroplastic pentatricopeptide repeat-containing protein At3g26630, chloroplastic pentatricopeptide repeat-containing protein At3g26630, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
gma03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102615965 822275 103875285 111198750 106409663 100789790 100807868 11439015
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