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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102617249   anthranilate synthase beta subunit 2, chloroplastic-like 
 ath-u.5   AT1G25155   Glutamine amidotransferase type 1 family protein 
 ath-u.5   AT5G57890   Glutamine amidotransferase type 1 family protein 
 ath-u.5   AT1G24807   Glutamine amidotransferase type 1 family protein 
 bra-r.6   103839088   anthranilate synthase beta subunit 1, chloroplastic 
 bra-r.6   103835440   anthranilate synthase beta subunit 1, chloroplastic 
 ghi-r.1   107918099   anthranilate synthase beta subunit 2, chloroplastic 
 ghi-r.1   107909961   anthranilate synthase beta subunit 2, chloroplastic 
 ghi-r.1   107886305   anthranilate synthase beta subunit 1, chloroplastic 
 bna-r.1   106367360   anthranilate synthase beta subunit 1, chloroplastic 
 bna-r.1   106361878   anthranilate synthase beta subunit 1, chloroplastic-like 
 bna-r.1   106361939   anthranilate synthase beta subunit 1, chloroplastic 
 gma-u.5   100778729   anthranilate synthase beta subunit 2, chloroplastic 
 gma-u.5   100781618   anthranilate synthase beta subunit 2, chloroplastic 
 vvi-u.5   100257728   anthranilate synthase beta subunit 1, chloroplastic 
 ppo-u.5   7459092   anthranilate synthase beta subunit 2, chloroplastic 
 mtr-u.5   25482615   anthranilate synthase beta subunit 1, chloroplastic 
 sly-u.5   101244841   anthranilate synthase beta subunit 2, chloroplastic-like 
 sot-r.1   102591009   anthranilate synthase beta subunit 2, chloroplastic-like 
 nta-r.1   107821559   anthranilate synthase beta subunit 2, chloroplastic-like 
 nta-r.1   107781613   anthranilate synthase beta subunit 1, chloroplastic 
 osa-u.5   4336076   anthranilate synthase beta subunit 1, chloroplastic-like 
 osa-u.5   4333918   anthranilate synthase beta subunit 2, chloroplastic-like 
 zma-u.5   118473590   anthranilate synthase beta subunit 1, chloroplastic 
 zma-u.5   542286   anthranilate synthase homolog1 
 zma-u.5   100383739   Anthranilate synthase beta subunit 1 chloroplastic 
 tae-r.2   123045687   anthranilate synthase beta subunit 1, chloroplastic 
 tae-r.2   123053560   anthranilate synthase beta subunit 1, chloroplastic 
 hvu-r.1   123442431   anthranilate synthase beta subunit 1, chloroplastic-like 
 hvu-r.1   123426933   anthranilate synthase beta subunit 1, chloroplastic-like 
 sbi-r.1   110436279   anthranilate synthase beta subunit 1, chloroplastic-like 
 sbi-r.1   8063370   anthranilate synthase beta subunit 2, chloroplastic 
 bdi-r.1   100825988   anthranilate synthase beta subunit 1, chloroplastic 
 cre-r.1   CHLRE_14g620300v5   uncharacterized protein 

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Top 50 coexpressed genes to 102617249 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102617249 (cit-r.1 coexpression data)

CoexMap"102617249"


citLOC102617249 | Entrez gene ID : 102617249    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 3 2 3 3 2 1 1 1 1 1 2 2 3 2 2 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (46 genes)
cit01230 [list] [network] Biosynthesis of amino acids (191 genes)
GO BP
GO:0000162 [list] [network] L-tryptophan biosynthetic process  (13 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (791 genes)  IEA  
GO MF
Protein XP_006469298.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_006469298.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006469298.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102617249
ath-u.5
for
AT1G25155
ath-u.5
for
AT5G57890
ath-u.5
for
AT1G24807
bra-r.6
for
103839088
bra-r.6
for
103835440
ghi-r.1
for
107918099
ghi-r.1
for
107909961
ghi-r.1
for
107886305
bna-r.1
for
106367360
bna-r.1
for
106361878
bna-r.1
for
106361939
gma-u.5
for
100778729
gma-u.5
for
100781618
vvi-u.5
for
100257728
ppo-u.5
for
7459092
mtr-u.5
for
25482615
sly-u.5
for
101244841
sot-r.1
for
102591009
nta-r.1
for
107821559
nta-r.1
for
107781613
osa-u.5
for
4336076
osa-u.5
for
4333918
zma-u.5
for
118473590
zma-u.5
for
542286
zma-u.5
for
100383739
tae-r.2
for
123045687
tae-r.2
for
123053560
hvu-r.1
for
123442431
hvu-r.1
for
123426933
sbi-r.1
for
110436279
sbi-r.1
for
8063370
bdi-r.1
for
100825988
cre-r.1
for
CHLRE_14g620300v5


Ortholog ID: 4300
Species cit ath ath ath bra bra ghi ghi ghi bna bna bna gma gma vvi ppo mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol LOC102617249 AT5G57890 AT1G24807 AT1G24909 LOC103839088 LOC103835440 LOC107918099 LOC107909961 LOC107946310 LOC106367360 LOC106361878 LOC106361939 LOC100778729 LOC100781618 LOC100257728 LOC7459092 LOC25482615 LOC101244841 LOC102591009 LOC107821559 LOC107781613 LOC4336076 LOC4333918 LOC118473590 LOC542286 LOC100383739 LOC123045687 LOC123064488 LOC123076906 LOC123442431 LOC123426933 LOC110436279 LOC8063370 LOC100825988 CHLRE_14g620300v5
Function* anthranilate synthase beta subunit 2, chloroplastic-like Glutamine amidotransferase type 1 family protein Glutamine amidotransferase type 1 family protein Glutamine amidotransferase type 1 family protein anthranilate synthase beta subunit 1, chloroplastic anthranilate synthase beta subunit 1, chloroplastic anthranilate synthase beta subunit 2, chloroplastic anthranilate synthase beta subunit 2, chloroplastic anthranilate synthase beta subunit 2, chloroplastic anthranilate synthase beta subunit 1, chloroplastic anthranilate synthase beta subunit 1, chloroplastic-like anthranilate synthase beta subunit 1, chloroplastic anthranilate synthase beta subunit 2, chloroplastic anthranilate synthase beta subunit 2, chloroplastic anthranilate synthase beta subunit 1, chloroplastic anthranilate synthase beta subunit 2, chloroplastic anthranilate synthase beta subunit 1, chloroplastic anthranilate synthase beta subunit 2, chloroplastic-like anthranilate synthase beta subunit 2, chloroplastic-like anthranilate synthase beta subunit 2, chloroplastic-like anthranilate synthase beta subunit 1, chloroplastic anthranilate synthase beta subunit 1, chloroplastic-like anthranilate synthase beta subunit 2, chloroplastic-like anthranilate synthase beta subunit 1, chloroplastic anthranilate synthase homolog1 Anthranilate synthase beta subunit 1 chloroplastic anthranilate synthase beta subunit 1, chloroplastic anthranilate synthase beta subunit 1, chloroplastic anthranilate synthase beta subunit 1, chloroplastic anthranilate synthase beta subunit 1, chloroplastic-like anthranilate synthase beta subunit 1, chloroplastic-like anthranilate synthase beta subunit 1, chloroplastic-like anthranilate synthase beta subunit 2, chloroplastic anthranilate synthase beta subunit 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 4
cit00900 Terpenoid backbone biosynthesis 3
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
ath01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
ath01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
ath01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 10
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
bra00920 Sulfur metabolism 4
bra00270 Cysteine and methionine metabolism 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 8
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bra00270 Cysteine and methionine metabolism 4
bra01240 Biosynthesis of cofactors 4
bra00920 Sulfur metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 7
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi03440 Homologous recombination 2
ghi03450 Non-homologous end-joining 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 11
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
bna00260 Glycine, serine and threonine metabolism 5
bna00270 Cysteine and methionine metabolism 3
bna00750 Vitamin B6 metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 12
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
bna00260 Glycine, serine and threonine metabolism 5
bna00270 Cysteine and methionine metabolism 3
bna00750 Vitamin B6 metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 11
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
bna00260 Glycine, serine and threonine metabolism 5
bna00270 Cysteine and methionine metabolism 3
bna00750 Vitamin B6 metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 10
gma01230 Biosynthesis of amino acids 3
gma04142 Lysosome 2
gma04145 Phagosome 2
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 4
gma04016 MAPK signaling pathway - plant 3
gma04070 Phosphatidylinositol signaling system 3
gma04075 Plant hormone signal transduction 3
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
vvi04016 MAPK signaling pathway - plant 2
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00511 Other glycan degradation 2
ppo00190 Oxidative phosphorylation 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr00053 Ascorbate and aldarate metabolism 3
mtr01230 Biosynthesis of amino acids 2
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 4
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00620 Pyruvate metabolism 2
nta00785 Lipoic acid metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 7
nta01200 Carbon metabolism 7
nta00010 Glycolysis / Gluconeogenesis 5
nta00020 Citrate cycle (TCA cycle) 5
nta00785 Lipoic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
osa01230 Biosynthesis of amino acids 6
osa00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 8
osa01230 Biosynthesis of amino acids 4
osa00360 Phenylalanine metabolism 3
osa04075 Plant hormone signal transduction 2
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
zma01230 Biosynthesis of amino acids 4
zma00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 11
tae01230 Biosynthesis of amino acids 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 2
tae00650 Butanoate metabolism 2
tae00900 Terpenoid backbone biosynthesis 2
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 3
tae00650 Butanoate metabolism 3
tae00900 Terpenoid backbone biosynthesis 3
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
hvu01230 Biosynthesis of amino acids 6
hvu00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
sbi01230 Biosynthesis of amino acids 9
sbi00380 Tryptophan metabolism 3
sbi00260 Glycine, serine and threonine metabolism 2
sbi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 8
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bdi00260 Glycine, serine and threonine metabolism 3
bdi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 5
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
cre00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102617249 835900 839085 839089 103839088 103835440 107918099 107909961 107946310 106367360 106361878 106361939 100778729 100781618 100257728 7459092 25482615 101244841 102591009 107821559 107781613 4336076 4333918 118473590 542286 100383739 123045687 123064488 123076906 123442431 123426933 110436279 8063370 100825988 5715885
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