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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102617716   elongation factor 1-alpha-like 
 cit-r.1   102613486   elongation factor 1-alpha 
 cit-r.1   102578002   elongation factor 1-alpha 
 ath-u.5   AT1G07920   GTP binding Elongation factor Tu family protein 
 ath-u.5   AT1G07940   GTP binding Elongation factor Tu family protein 
 ath-u.5   AT1G07930   GTP binding Elongation factor Tu family protein 
 bra-r.6   103843422   elongation factor 1-alpha 1 
 bra-r.6   117128168   elongation factor 1-alpha 1 
 bra-r.6   103871542   elongation factor 1-alpha 1 
 ghi-r.1   107905285   elongation factor 1-alpha 
 ghi-r.1   107917986   elongation factor 1-alpha-like 
 ghi-r.1   107922028   elongation factor 1-alpha 
 bna-r.1   106385889   elongation factor 1-alpha 1 
 bna-r.1   106346370   elongation factor 1-alpha 1 
 gma-u.5   EF4   elongation factor 1-alpha 
 gma-u.5   100801611   elongation factor 1-alpha 
 gma-u.5   100807572   elongation factor 1-alpha-like 
 vvi-u.5   100261589   elongation factor 1-alpha-like 
 vvi-u.5   100256979   elongation factor 1-alpha 
 vvi-u.5   100246711   elongation factor 1-alpha 
 ppo-u.5   7489636   elongation factor 1-alpha 
 ppo-u.5   18100225   elongation factor 1-alpha 
 ppo-u.5   18109220   elongation factor 1-alpha 
 mtr-u.5   112416106   elongation factor 1-alpha 
 mtr-u.5   25482202   elongation factor 1-alpha 
 mtr-u.5   25484712   elongation factor 1-alpha 
 sly-u.5   544055   elongation factor 1-alpha 
 sot-r.1   102577640   elongation factor 1-alpha-like protein 
 sot-r.1   102600107   elongation factor 1-alpha 
 sot-r.1   102600444   elongation factor 1-alpha-like 
 nta-r.1   107762762   elongation factor 1-alpha 
 nta-r.1   107764785   elongation factor 1-alpha-like 
 nta-r.1   107827212   elongation factor 1-alpha-like 
 osa-u.5   4331813   elongation factor 1-alpha-like 
 osa-u.5   4331812   elongation factor 1-alpha-like 
 osa-u.5   4331811   elongation factor 1-alpha-like 
 zma-u.5   103635497   elongation factor 1-alpha 
 zma-u.5   103630200   elongation factor 1-alpha-like 
 zma-u.5   100286309   uncharacterized LOC100286309 
 tae-r.2   123085550   elongation factor 1-alpha-like 
 tae-r.2   123051372   elongation factor 1-alpha 
 tae-r.2   123043509   elongation factor 1-alpha 
 hvu-r.1   123401327   elongation factor 1-alpha-like 
 hvu-r.1   123424588   elongation factor 1-alpha 
 hvu-r.1   123424589   elongation factor 1-alpha 
 sbi-r.1   8081751   elongation factor 1-alpha 
 sbi-r.1   110430915   elongation factor 1-alpha 
 sbi-r.1   110430916   elongation factor 1-alpha 
 bdi-r.1   100822789   elongation factor 1-alpha 
 bdi-r.1   100842991   elongation factor 1-alpha 
 bdi-r.1   100844543   elongation factor 1-alpha 
 cre-r.1   CHLRE_06g263450v5   uncharacterized protein 
 cre-r.1   CHLRE_12g498600v5   uncharacterized protein 

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Top 50 coexpressed genes to 102617716 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102617716 (cit-r.1 coexpression data)

CoexMap"102617716"


citLOC102617716 | Entrez gene ID : 102617716    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 3 3 2 3 3 3 3 1 3 3 3 3 3 3 3 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03013 [list] [network] Nucleocytoplasmic transport (96 genes)
GO BP
GO:0006414 [list] [network] translational elongation  (29 genes)  IEA  
GO:0006412 [list] [network] translation  (405 genes)  IEA  
GO CC
GO MF
GO:0003746 [list] [network] translation elongation factor activity  (24 genes)  IEA  
GO:0003924 [list] [network] GTPase activity  (166 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (200 genes)  IEA  
Protein XP_006488149.1 [sequence] [blastp]
XP_052288523.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for XP_006488149.1)
cyto 9  (predict for XP_052288523.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006488149.1)
other 8  (predict for XP_052288523.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102617716
cit-r.1
for
102613486
cit-r.1
for
102578002
ath-u.5
for
AT1G07920
ath-u.5
for
AT1G07940
ath-u.5
for
AT1G07930
bra-r.6
for
103843422
bra-r.6
for
117128168
bra-r.6
for
103871542
ghi-r.1
for
107905285
ghi-r.1
for
107917986
ghi-r.1
for
107922028
bna-r.1
for
106385889
bna-r.1
for
106346370
gma-u.5
for
EF4
gma-u.5
for
100801611
gma-u.5
for
100807572
vvi-u.5
for
100261589
vvi-u.5
for
100256979
vvi-u.5
for
100246711
ppo-u.5
for
7489636
ppo-u.5
for
18100225
ppo-u.5
for
18109220
mtr-u.5
for
112416106
mtr-u.5
for
25482202
mtr-u.5
for
25484712
sly-u.5
for
544055
sot-r.1
for
102577640
sot-r.1
for
102600107
sot-r.1
for
102600444
nta-r.1
for
107762762
nta-r.1
for
107764785
nta-r.1
for
107827212
osa-u.5
for
4331813
osa-u.5
for
4331812
osa-u.5
for
4331811
zma-u.5
for
103635497
zma-u.5
for
103630200
zma-u.5
for
100286309
tae-r.2
for
123085550
tae-r.2
for
123051372
tae-r.2
for
123043509
hvu-r.1
for
123401327
hvu-r.1
for
123424588
hvu-r.1
for
123424589
sbi-r.1
for
8081751
sbi-r.1
for
110430915
sbi-r.1
for
110430916
bdi-r.1
for
100822789
bdi-r.1
for
100842991
bdi-r.1
for
100844543
cre-r.1
for
CHLRE_06g263450v5
cre-r.1
for
CHLRE_12g498600v5


Ortholog ID: 397
Species cit cit ath ath ath bra bra bra ghi ghi ghi bna bna bna gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre cre
Symbol LOC102617716 LOC102578002 AT1G07920 AT1G07930 AT5G60390 LOC103843422 LOC103871542 LOC103845458 LOC107905285 LOC107899669 LOC107899668 LOC106371602 LOC106419721 LOC106400771 EF4 LOC100801611 LOC100785429 LOC100256979 LOC100246711 LOC100244821 LOC18100225 LOC18109220 LOC7457880 LOC25485829 LOC11414537 LOC11424327 LOC544055 LOC101264700 LOC102600107 LOC102600998 LOC102577446 LOC107827212 LOC107812355 LOC107791623 LOC4331812 LOC4331811 LOC4331810 LOC103635497 LOC100284707 LOC103635498 LOC123113510 LOC123113509 LOC123092491 LOC123424588 LOC123424589 LOC123452502 LOC8081751 LOC110430915 LOC110430916 LOC100822789 LOC100822582 LOC104581282 CHLRE_06g263450v5 CHLRE_12g498600v5
Function* elongation factor 1-alpha-like elongation factor 1-alpha GTP binding Elongation factor Tu family protein GTP binding Elongation factor Tu family protein GTP binding Elongation factor Tu family protein elongation factor 1-alpha 1 elongation factor 1-alpha 1 elongation factor 1-alpha 1 elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha 1 elongation factor 1-alpha 1 elongation factor 1-alpha 1 elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha-like elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha-like protein elongation factor 1-alpha-like elongation factor 1-alpha-like elongation factor 1-alpha-like elongation factor 1-alpha-like elongation factor 1-alpha-like elongation factor 1-alpha-like elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha-like elongation factor 1-alpha-like elongation factor 1-alpha-like elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha elongation factor 1-alpha uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit00010 Glycolysis / Gluconeogenesis 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
cit03013 Nucleocytoplasmic transport 3
cit01210 2-Oxocarboxylic acid metabolism 3
cit01230 Biosynthesis of amino acids 3
cit00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath03013 Nucleocytoplasmic transport 5
ath03015 mRNA surveillance pathway 4
ath03040 Spliceosome 3
ath03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03010 Ribosome 4
ath03015 mRNA surveillance pathway 3
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath03013 Nucleocytoplasmic transport 5
ath03015 mRNA surveillance pathway 4
ath03040 Spliceosome 3
ath03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 7
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 7
bra00053 Ascorbate and aldarate metabolism 2
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 8
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 10
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03013 Nucleocytoplasmic transport 4
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00270 Cysteine and methionine metabolism 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
gma03013 Nucleocytoplasmic transport 3
gma00020 Citrate cycle (TCA cycle) 2
gma00270 Cysteine and methionine metabolism 2
gma00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03083 Polycomb repressive complex 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi04141 Protein processing in endoplasmic reticulum 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
ppo01230 Biosynthesis of amino acids 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 5
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 5
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly03013 Nucleocytoplasmic transport 3
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 6
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 6
sot04814 Motor proteins 2
sot00010 Glycolysis / Gluconeogenesis 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 11
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 11
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 10
nta00860 Porphyrin metabolism 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
osa03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 8
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
zma04120 Ubiquitin mediated proteolysis 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 7
zma03010 Ribosome 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 5
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
sbi03013 Nucleocytoplasmic transport 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi03013 Nucleocytoplasmic transport 4
sbi04016 MAPK signaling pathway - plant 2
sbi04070 Phosphatidylinositol signaling system 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 6
cre01210 2-Oxocarboxylic acid metabolism 4
cre00270 Cysteine and methionine metabolism 3
cre03013 Nucleocytoplasmic transport 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 7
cre01230 Biosynthesis of amino acids 5
cre01210 2-Oxocarboxylic acid metabolism 3
cre03013 Nucleocytoplasmic transport 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102617716 102578002 837307 837308 836161 103843422 103871542 103845458 107905285 107899669 107899668 106371602 106419721 106400771 110008577 100801611 100785429 100256979 100246711 100244821 18100225 18109220 7457880 25485829 11414537 11424327 544055 101264700 102600107 102600998 102577446 107827212 107812355 107791623 4331812 4331811 4331810 103635497 100284707 103635498 123113510 123113509 123092491 123424588 123424589 123452502 8081751 110430915 110430916 100822789 100822582 104581282 5721993 5727887
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