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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102619405   uncharacterized LOC102619405 
 bra-r.6   103873778   SOSS complex subunit B homolog 
 ghi-r.1   107936897   SOSS complex subunit B homolog 
 ghi-r.1   107930157   SOSS complex subunit B homolog 
 bna-r.1   125581583   SOSS complex subunit B homolog 
 gma-u.5   100500643   uncharacterized LOC100500643 
 gma-u.5   100801637   SOSS complex subunit B homolog 
 ppo-u.5   7494078   uncharacterized LOC7494078 
 mtr-u.5   11416314   SOSS complex subunit B homolog 
 sly-u.5   101254168   uncharacterized LOC101254168 
 sot-r.1   102582449   SOSS complex subunit B homolog 
 nta-r.1   107811944   uncharacterized LOC107811944 
 osa-u.5   9270338   uncharacterized LOC9270338 
 zma-u.5   100276318   uncharacterized LOC100276318 
 tae-r.2   123060889   SOSS complex subunit B homolog 
 hvu-r.1   123443831   SOSS complex subunit B homolog 
 bdi-r.1   100837023   SOSS complex subunit B homolog 

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Top 50 coexpressed genes to 102619405 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102619405 (cit-r.1 coexpression data)

CoexMap"102619405"


citLOC102619405 | Entrez gene ID : 102619405      
Species cit bra ghi bna gma ppo mtr sly sot nta osa zma tae hvu bdi vvi cre ath sbi
Paralog 1 1 2 1 2 1 1 1 1 1 1 1 1 1 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010212 [list] [network] response to ionizing radiation  (6 genes)  IEA  
GO:0007093 [list] [network] mitotic cell cycle checkpoint signaling  (30 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (65 genes)  IEA  
GO CC
GO:0070876 [list] [network] SOSS complex  (1 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (1476 genes)  IEA  
Protein XP_052293081.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 3,  cyto_pero 3,  cyto_E.R. 3  (predict for XP_052293081.1)
Subcellular
localization
TargetP
other 9  (predict for XP_052293081.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102619405
bra-r.6
for
103873778
ghi-r.1
for
107936897
ghi-r.1
for
107930157
bna-r.1
for
125581583
gma-u.5
for
100500643
gma-u.5
for
100801637
ppo-u.5
for
7494078
mtr-u.5
for
11416314
sly-u.5
for
101254168
sot-r.1
for
102582449
nta-r.1
for
107811944
osa-u.5
for
9270338
zma-u.5
for
100276318
tae-r.2
for
123060889
hvu-r.1
for
123443831
bdi-r.1
for
100837023


Ortholog ID: 7008
Species cit bra ghi ghi bna gma gma ppo mtr sly sot nta osa zma tae tae hvu bdi
Symbol LOC102619405 LOC103873778 LOC107936897 LOC107930157 LOC125581583 LOC100500643 LOC100801637 LOC7494078 LOC11416314 LOC101254168 LOC102582449 LOC107811944 LOC9270338 LOC100276318 LOC123060889 LOC123182468 LOC123443831 LOC100837023
Function* uncharacterized LOC102619405 SOSS complex subunit B homolog SOSS complex subunit B homolog SOSS complex subunit B homolog SOSS complex subunit B homolog uncharacterized LOC100500643 SOSS complex subunit B homolog uncharacterized LOC7494078 SOSS complex subunit B homolog uncharacterized LOC101254168 SOSS complex subunit B homolog uncharacterized LOC107811944 uncharacterized LOC9270338 uncharacterized LOC100276318 SOSS complex subunit B homolog SOSS complex subunit B homolog SOSS complex subunit B homolog SOSS complex subunit B homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 4
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly00770 Pantothenate and CoA biosynthesis 2
sly01210 2-Oxocarboxylic acid metabolism 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102619405 103873778 107936897 107930157 125581583 100500643 100801637 7494078 11416314 101254168 102582449 107811944 9270338 100276318 123060889 123182468 123443831 100837023
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