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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102619644   30S ribosomal protein S5, chloroplastic 
 ath-u.5   EMB3113   Ribosomal protein S5 family protein 
 bra-r.6   103865299   30S ribosomal protein S5, chloroplastic 
 ghi-r.1   121230893   30S ribosomal protein S5, chloroplastic 
 ghi-r.1   107960211   30S ribosomal protein S5, chloroplastic 
 ghi-r.1   107913964   30S ribosomal protein S5, chloroplastic 
 bna-r.1   106423075   30S ribosomal protein S5, chloroplastic 
 bna-r.1   106423691   30S ribosomal protein S5, chloroplastic-like 
 gma-u.5   100820232   30S ribosomal protein S5 
 gma-u.5   100787105   30S ribosomal protein S5 
 ppo-u.5   7456788   30S ribosomal protein S5, chloroplastic 
 mtr-u.5   25493131   30S ribosomal protein S5, chloroplastic 
 sly-u.5   101255358   small ribosomal subunit protein uS5c 
 sot-r.1   102585478   30S ribosomal protein S5, chloroplastic 
 nta-r.1   107825867   small ribosomal subunit protein uS5c-like 
 nta-r.1   107801182   uncharacterized LOC107801182 
 nta-r.1   107825411   small ribosomal subunit protein uS5c 
 osa-u.5   4333233   uncharacterized LOC4333233 
 zma-u.5   103643355   30S ribosomal protein S5, chloroplastic-like 
 tae-r.2   123086179   30S ribosomal protein S5, chloroplastic 
 tae-r.2   123092133   30S ribosomal protein S5 
 tae-r.2   123097143   30S ribosomal protein S5 
 hvu-r.1   123448516   30S ribosomal protein S5 
 sbi-r.1   8065677   30S ribosomal protein S5 
 bdi-r.1   100841719   30S ribosomal protein S5 
 cre-r.1   CHLRE_16g659950v5   uncharacterized protein 

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Top 50 coexpressed genes to 102619644 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102619644 (cit-r.1 coexpression data)

CoexMap"102619644"


citLOC102619644 | Entrez gene ID : 102619644    
Species cit ath bra ghi bna gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi
Paralog 1 1 1 3 2 2 1 1 1 1 3 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03010 [list] [network] Ribosome (798 genes)
GO BP
GO:0006412 [list] [network] translation  (405 genes)  IEA  
GO CC
GO:0005763 [list] [network] mitochondrial small ribosomal subunit  (8 genes)  IEA  
GO:0005840 [list] [network] ribosome  (289 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (284 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
Protein XP_006467770.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_006467770.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_006467770.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102619644
ath-u.5
for
EMB3113
bra-r.6
for
103865299
ghi-r.1
for
121230893
ghi-r.1
for
107960211
ghi-r.1
for
107913964
bna-r.1
for
106423075
bna-r.1
for
106423691
gma-u.5
for
100820232
gma-u.5
for
100787105
ppo-u.5
for
7456788
mtr-u.5
for
25493131
sly-u.5
for
101255358
sot-r.1
for
102585478
nta-r.1
for
107825867
nta-r.1
for
107801182
nta-r.1
for
107825411
osa-u.5
for
4333233
zma-u.5
for
103643355
tae-r.2
for
123086179
tae-r.2
for
123092133
tae-r.2
for
123097143
hvu-r.1
for
123448516
sbi-r.1
for
8065677
bdi-r.1
for
100841719
cre-r.1
for
CHLRE_16g659950v5


Ortholog ID: 7940
Species cit ath bra ghi ghi ghi bna bna gma gma ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102619644 EMB3113 LOC103865299 LOC121230893 LOC107960211 LOC107905792 LOC106423075 LOC106423691 LOC100820232 LOC100787105 LOC7456788 LOC25493131 LOC101255358 LOC102585478 LOC107801182 LOC107825411 LOC107827568 LOC4333233 LOC103643355 LOC123086179 LOC123092133 LOC123097143 LOC123448516 LOC8065677 LOC100841719 CHLRE_16g659950v5
Function* 30S ribosomal protein S5, chloroplastic Ribosomal protein S5 family protein 30S ribosomal protein S5, chloroplastic 30S ribosomal protein S5, chloroplastic 30S ribosomal protein S5, chloroplastic 30S ribosomal protein S5, chloroplastic 30S ribosomal protein S5, chloroplastic 30S ribosomal protein S5, chloroplastic-like 30S ribosomal protein S5 30S ribosomal protein S5 30S ribosomal protein S5, chloroplastic 30S ribosomal protein S5, chloroplastic small ribosomal subunit protein uS5c 30S ribosomal protein S5, chloroplastic uncharacterized LOC107801182 small ribosomal subunit protein uS5c small ribosomal subunit protein uS5c-like uncharacterized LOC4333233 30S ribosomal protein S5, chloroplastic-like 30S ribosomal protein S5, chloroplastic 30S ribosomal protein S5 30S ribosomal protein S5 30S ribosomal protein S5 30S ribosomal protein S5 30S ribosomal protein S5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi00860 Porphyrin metabolism 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi00860 Porphyrin metabolism 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi00860 Porphyrin metabolism 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
mtr00860 Porphyrin metabolism 3
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00785 Lipoic acid metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03060 Protein export 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03060 Protein export 2
nta00860 Porphyrin metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta01200 Carbon metabolism 3
nta03060 Protein export 2
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae00230 Purine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi00860 Porphyrin metabolism 4
sbi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 12
cre00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102619644 817947 103865299 121230893 107960211 107905792 106423075 106423691 100820232 100787105 7456788 25493131 101255358 102585478 107801182 107825411 107827568 4333233 103643355 123086179 123092133 123097143 123448516 8065677 100841719 5723486
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