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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102620001   hypothetical protein 
 ath-u.5   AT5G11000   hypothetical protein (DUF868) 
 bra-r.6   103850289   uncharacterized LOC103850289 
 bra-r.6   103846761   uncharacterized LOC103846761 
 ghi-r.1   107962928   uncharacterized LOC107962928 
 ghi-r.1   107960825   uncharacterized LOC107960825 
 ghi-r.1   107953750   uncharacterized LOC107953750 
 bna-r.1   106415682   uncharacterized LOC106415682 
 bna-r.1   106413077   uncharacterized LOC106413077 
 gma-u.5   100819926   uncharacterized LOC100819926 
 gma-u.5   100806546   uncharacterized LOC100806546 
 gma-u.5   100775282   uncharacterized LOC100775282 
 vvi-u.5   100262872   uncharacterized LOC100262872 
 ppo-u.5   7465407   uncharacterized LOC7465407 
 ppo-u.5   18100702   uncharacterized LOC18100702 
 mtr-u.5   11425827   uncharacterized LOC11425827 
 mtr-u.5   25481951   uncharacterized LOC25481951 
 sly-u.5   101262938   uncharacterized LOC101262938 
 sot-r.1   102585370   uncharacterized LOC102585370 
 nta-r.1   107830379   uncharacterized LOC107830379 
 nta-r.1   107775407   uncharacterized LOC107775407 

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Top 50 coexpressed genes to 102620001 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102620001 (cit-r.1 coexpression data)

CoexMap"102620001"


citLOC102620001 | Entrez gene ID : 102620001      
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 1 1 2 3 2 3 1 2 2 1 1 2 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_006483448.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  extr 1  (predict for XP_006483448.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_006483448.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102620001
ath-u.5
for
AT5G11000
bra-r.6
for
103850289
bra-r.6
for
103846761
ghi-r.1
for
107962928
ghi-r.1
for
107960825
ghi-r.1
for
107953750
bna-r.1
for
106415682
bna-r.1
for
106413077
gma-u.5
for
100819926
gma-u.5
for
100806546
gma-u.5
for
100775282
vvi-u.5
for
100262872
ppo-u.5
for
7465407
ppo-u.5
for
18100702
mtr-u.5
for
11425827
mtr-u.5
for
25481951
sly-u.5
for
101262938
sot-r.1
for
102585370
nta-r.1
for
107830379
nta-r.1
for
107775407


Ortholog ID: 10291
Species cit ath bra bra ghi ghi ghi bna bna gma gma gma vvi ppo ppo mtr mtr sly sot nta nta
Symbol LOC102620001 AT5G11000 LOC103850289 LOC103846761 LOC107962928 LOC107953750 LOC107906849 LOC106415682 LOC106413077 LOC100806546 LOC100775282 LOC100783731 LOC100262872 LOC7465407 LOC18100702 LOC11425827 LOC25481951 LOC101262938 LOC102585370 LOC107830379 LOC107775407
Function* hypothetical protein hypothetical protein (DUF868) uncharacterized LOC103850289 uncharacterized LOC103846761 uncharacterized LOC107962928 uncharacterized LOC107953750 uncharacterized LOC107906849 uncharacterized LOC106415682 uncharacterized LOC106413077 uncharacterized LOC100806546 uncharacterized LOC100775282 uncharacterized LOC100783731 uncharacterized LOC100262872 uncharacterized LOC7465407 uncharacterized LOC18100702 uncharacterized LOC11425827 uncharacterized LOC25481951 uncharacterized LOC101262938 uncharacterized LOC102585370 uncharacterized LOC107830379 uncharacterized LOC107775407
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01250 Biosynthesis of nucleotide sugars 4
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath04075 Plant hormone signal transduction 2
ath00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00942 Anthocyanin biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 3
gma00030 Pentose phosphate pathway 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
sly04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102620001 830967 103850289 103846761 107962928 107953750 107906849 106415682 106413077 100806546 100775282 100783731 100262872 7465407 18100702 11425827 25481951 101262938 102585370 107830379 107775407
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