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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102620474   F-box/LRR-repeat protein 4 
 ath-u.5   AT5G23340   RNI-like superfamily protein 
 bra-r.6   103874209   F-box/LRR-repeat protein 2 
 bra-r.6   103854904   F-box/LRR-repeat protein 4-like 
 ghi-r.1   107946093   F-box/LRR-repeat protein 4 
 ghi-r.1   107931234   F-box/LRR-repeat protein 4 
 bna-r.1   106439884   F-box/LRR-repeat protein 4 
 bna-r.1   106404580   F-box/LRR-repeat protein 4-like 
 bna-r.1   106382708   F-box/LRR-repeat protein 4 
 gma-u.5   100781531   F-box/LRR-repeat protein 2 
 gma-u.5   100803599   F-box/LRR-repeat protein 2 
 vvi-u.5   100241300   uncharacterized LOC100241300 
 ppo-u.5   7477149   F-box/LRR-repeat protein 4 
 mtr-u.5   25485659   F-box/LRR-repeat protein 4 
 sly-u.5   101268382   uncharacterized LOC101268382 
 sot-r.1   102585424   F-box/LRR-repeat protein 2 
 nta-r.1   107762429   uncharacterized LOC107762429 
 nta-r.1   107777555   uncharacterized LOC107777555 
 osa-u.5   4330084   uncharacterized LOC4330084 
 zma-u.5   100277153   uncharacterized LOC100277153 
 tae-r.2   123144915   F-box/LRR-repeat protein 2 
 tae-r.2   123137582   F-box/LRR-repeat protein 2 
 tae-r.2   123127817   F-box/LRR-repeat protein 2 
 hvu-r.1   123403049   F-box/LRR-repeat protein 20 
 sbi-r.1   8066189   F-box/LRR-repeat protein 20 
 bdi-r.1   100824910   uncharacterized F-box/LRR-repeat protein C02F5.7 

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Top 50 coexpressed genes to 102620474 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102620474 (cit-r.1 coexpression data)

CoexMap"102620474"


citLOC102620474 | Entrez gene ID : 102620474    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 2 2 3 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (49 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (45 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006484494.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_006484494.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006484494.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102620474
ath-u.5
for
AT5G23340
bra-r.6
for
103874209
bra-r.6
for
103854904
ghi-r.1
for
107946093
ghi-r.1
for
107931234
bna-r.1
for
106439884
bna-r.1
for
106404580
bna-r.1
for
106382708
gma-u.5
for
100781531
gma-u.5
for
100803599
vvi-u.5
for
100241300
ppo-u.5
for
7477149
mtr-u.5
for
25485659
sly-u.5
for
101268382
sot-r.1
for
102585424
nta-r.1
for
107762429
nta-r.1
for
107777555
osa-u.5
for
4330084
zma-u.5
for
100277153
tae-r.2
for
123144915
tae-r.2
for
123137582
tae-r.2
for
123127817
hvu-r.1
for
123403049
sbi-r.1
for
8066189
bdi-r.1
for
100824910


Ortholog ID: 8619
Species cit ath bra bra ghi ghi bna bna bna gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC102620474 AT5G23340 LOC103874209 LOC103854904 LOC107946093 LOC107931234 LOC106439884 LOC106382708 LOC106348336 LOC100781531 LOC100803599 LOC100241300 LOC7477149 LOC25485659 LOC101268382 LOC102585424 LOC107762429 LOC107777555 LOC4330084 LOC100277153 LOC123144915 LOC123137582 LOC123127817 LOC123403049 LOC8066189 LOC100824910
Function* F-box/LRR-repeat protein 4 RNI-like superfamily protein F-box/LRR-repeat protein 2 F-box/LRR-repeat protein 4-like F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 2 F-box/LRR-repeat protein 2 F-box/LRR-repeat protein 2 uncharacterized LOC100241300 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 uncharacterized LOC101268382 F-box/LRR-repeat protein 2 uncharacterized LOC107762429 uncharacterized LOC107777555 uncharacterized LOC4330084 uncharacterized LOC100277153 F-box/LRR-repeat protein 2 F-box/LRR-repeat protein 2 F-box/LRR-repeat protein 2 F-box/LRR-repeat protein 20 F-box/LRR-repeat protein 20 uncharacterized F-box/LRR-repeat protein C02F5.7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04136 Autophagy - other 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00510 N-Glycan biosynthesis 4
sbi04141 Protein processing in endoplasmic reticulum 4
sbi00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102620474 832398 103874209 103854904 107946093 107931234 106439884 106382708 106348336 100781531 100803599 100241300 7477149 25485659 101268382 102585424 107762429 107777555 4330084 100277153 123144915 123137582 123127817 123403049 8066189 100824910
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