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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102620786   probable helicase MAGATAMA 3 
 ath-u.5   MAA3   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 bra-r.6   103870484   probable helicase MAGATAMA 3 
 bra-r.6   103846874   probable helicase MAGATAMA 3 
 ghi-r.1   121222476   probable helicase MAGATAMA 3 
 ghi-r.1   107908603   probable helicase MAGATAMA 3 
 bna-r.1   106419085   probable helicase MAGATAMA 3 
 bna-r.1   106352544   probable helicase MAGATAMA 3 
 bna-r.1   106380637   probable helicase MAGATAMA 3 
 gma-u.5   100804610   probable helicase MAGATAMA 3 
 vvi-u.5   100263445   probable helicase MAGATAMA 3 
 ppo-u.5   7461301   probable helicase MAGATAMA 3 
 mtr-u.5   25483420   probable helicase MAGATAMA 3 
 mtr-u.5   11436919   probable helicase MAGATAMA 3 
 sly-u.5   101265174   probable helicase MAGATAMA 3 
 sot-r.1   102596909   probable helicase MAGATAMA 3 
 nta-r.1   107788829   putative helicase MAGATAMA 3 
 nta-r.1   107778827   putative helicase MAGATAMA 3 
 osa-u.5   4340855   probable helicase MAGATAMA 3 
 osa-u.5   4340858   probable helicase MAGATAMA 3 
 zma-u.5   100280423   uncharacterized LOC100280423 
 tae-r.2   123129429   probable helicase MAGATAMA 3 
 tae-r.2   123132064   probable helicase MAGATAMA 3 
 tae-r.2   123136090   probable helicase MAGATAMA 3 
 hvu-r.1   123401355   probable helicase MAGATAMA 3 
 sbi-r.1   8086252   probable helicase MAGATAMA 3 
 bdi-r.1   100824143   probable helicase MAGATAMA 3 
 cre-r.1   CHLRE_06g263800v5   uncharacterized protein 

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Top 50 coexpressed genes to 102620786 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102620786 (cit-r.1 coexpression data)

CoexMap"102620786"


citLOC102620786 | Entrez gene ID : 102620786    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 2 2 3 1 1 1 2 1 1 2 2 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004386 [list] [network] helicase activity  (103 genes)  IEA  
Protein XP_052297931.1 [sequence] [blastp]
XP_052297932.1 [sequence] [blastp]
XP_052297933.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 2,  vacu 1,  pero 1  (predict for XP_052297931.1)
nucl 4,  chlo 3,  cyto_nucl 3  (predict for XP_052297932.1)
chlo 7,  cyto 1,  nucl 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_052297933.1)
Subcellular
localization
TargetP
other 8  (predict for XP_052297931.1)
other 8  (predict for XP_052297932.1)
other 4  (predict for XP_052297933.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102620786
ath-u.5
for
MAA3
bra-r.6
for
103870484
bra-r.6
for
103846874
ghi-r.1
for
121222476
ghi-r.1
for
107908603
bna-r.1
for
106419085
bna-r.1
for
106352544
bna-r.1
for
106380637
gma-u.5
for
100804610
vvi-u.5
for
100263445
ppo-u.5
for
7461301
mtr-u.5
for
25483420
mtr-u.5
for
11436919
sly-u.5
for
101265174
sot-r.1
for
102596909
nta-r.1
for
107788829
nta-r.1
for
107778827
osa-u.5
for
4340855
osa-u.5
for
4340858
zma-u.5
for
100280423
tae-r.2
for
123129429
tae-r.2
for
123132064
tae-r.2
for
123136090
hvu-r.1
for
123401355
sbi-r.1
for
8086252
bdi-r.1
for
100824143
cre-r.1
for
CHLRE_06g263800v5


Ortholog ID: 6607
Species cit ath bra bra ghi ghi bna bna bna gma vvi ppo mtr mtr sly sot nta nta osa osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102620786 MAA3 LOC103870484 LOC103846874 LOC121222476 LOC107908603 LOC106419085 LOC106352544 LOC106380637 LOC100804610 LOC100263445 LOC7461301 LOC25483420 LOC11436919 LOC101265174 LOC102596909 LOC107788829 LOC107778827 LOC4340855 LOC4340858 LOC100280423 LOC123129429 LOC123132064 LOC123136090 LOC123401355 LOC8086252 LOC100824143 CHLRE_06g263800v5
Function* probable helicase MAGATAMA 3 P-loop containing nucleoside triphosphate hydrolases superfamily protein probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 putative helicase MAGATAMA 3 putative helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 uncharacterized LOC100280423 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 probable helicase MAGATAMA 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 6
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma03440 Homologous recombination 2
gma03040 Spliceosome 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 5
mtr03020 RNA polymerase 2
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03030 DNA replication 2
osa03410 Base excision repair 2
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00230 Purine metabolism 2
tae01232 Nucleotide metabolism 2
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03018 RNA degradation 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
cre03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102620786 827233 103870484 103846874 121222476 107908603 106419085 106352544 106380637 100804610 100263445 7461301 25483420 11436919 101265174 102596909 107788829 107778827 4340855 4340858 100280423 123129429 123132064 123136090 123401355 8086252 100824143 5721986
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