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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102623889   40S ribosomal protein S2-4 
 cit-r.1   127899038   40S ribosomal protein S2-4-like 
 ath-u.5   AT2G41840   Ribosomal protein S5 family protein 
 ath-u.5   AT1G59359   Ribosomal protein S5 family protein 
 ath-u.5   AT1G58983   Ribosomal protein S5 family protein 
 bra-r.6   103865907   40S ribosomal protein S2-2 
 bra-r.6   103866593   40S ribosomal protein S2-3 
 bra-r.6   103828995   40S ribosomal protein S2-2 
 ghi-r.1   107891409   40S ribosomal protein S2-4 
 ghi-r.1   107912119   40S ribosomal protein S2-2 
 bna-r.1   106451420   40S ribosomal protein S2-2 
 bna-r.1   106437974   40S ribosomal protein S2-2-like 
 bna-r.1   106376707   40S ribosomal protein S2-2 
 gma-u.5   100809096   40S ribosomal protein S2-4 
 gma-u.5   100797105   40S ribosomal protein S2-4 
 gma-u.5   100820352   40S ribosomal protein S2-4 
 vvi-u.5   100260573   40S ribosomal protein S2-4-like 
 ppo-u.5   7465143   40S ribosomal protein S2-4 
 mtr-u.5   25482548   40S ribosomal protein S2-4 
 mtr-u.5   11417021   40S ribosomal protein S2-3 
 sly-u.5   101258363   small ribosomal subunit protein uS5w 
 sly-u.5   101254082   small ribosomal subunit protein uS5x-like 
 sot-r.1   102604693   40S ribosomal protein S2-3-like 
 sot-r.1   102581781   40S ribosomal protein S2-4-like 
 nta-r.1   107795726   uncharacterized LOC107795726 
 nta-r.1   107800510   uncharacterized LOC107800510 
 nta-r.1   107763154   uncharacterized LOC107763154 
 osa-u.5   4334512   small ribosomal subunit protein uS5x 
 osa-u.5   4342695   small ribosomal subunit protein uS5x 
 zma-u.5   103625791   40S ribosomal protein S2-3 
 zma-u.5   100283974   40S ribosomal protein S2-like 
 zma-u.5   100383062   40S ribosomal protein S2-1 
 tae-r.2   123105549   40S ribosomal protein S2-3 
 tae-r.2   123062616   40S ribosomal protein S2-3 
 tae-r.2   123071230   40S ribosomal protein S2-3 
 hvu-r.1   123444916   40S ribosomal protein S2-3-like 
 hvu-r.1   123452881   40S ribosomal protein S2-3-like 
 sbi-r.1   8078426   40S ribosomal protein S2-3 
 sbi-r.1   8081205   40S ribosomal protein S2-3 
 sbi-r.1   8081204   40S ribosomal protein S2-3 
 bdi-r.1   100833918   40S ribosomal protein S2-4 
 bdi-r.1   100822310   40S ribosomal protein S2-3 
 cre-r.1   CHLRE_01g039250v5   ribosomal protein S2;uncharacterized protein 

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Top 50 coexpressed genes to 102623889 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102623889 (cit-r.1 coexpression data)

CoexMap"102623889"


citLOC102623889 | Entrez gene ID : 102623889    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 3 2 3 3 1 1 2 2 2 3 2 3 3 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03010 [list] [network] Ribosome (798 genes)
GO BP
GO:0006412 [list] [network] translation  (405 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (61 genes)  IEA  
GO:0005840 [list] [network] ribosome  (289 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (284 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
Protein XP_015389343.3 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  chlo 3,  plas 1,  chlo_mito 1  (predict for XP_015389343.3)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for XP_015389343.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102623889
cit-r.1
for
127899038
ath-u.5
for
AT2G41840
ath-u.5
for
AT1G59359
ath-u.5
for
AT1G58983
bra-r.6
for
103865907
bra-r.6
for
103866593
bra-r.6
for
103828995
ghi-r.1
for
107891409
ghi-r.1
for
107912119
bna-r.1
for
106451420
bna-r.1
for
106437974
bna-r.1
for
106376707
gma-u.5
for
100809096
gma-u.5
for
100797105
gma-u.5
for
100820352
vvi-u.5
for
100260573
ppo-u.5
for
7465143
mtr-u.5
for
25482548
mtr-u.5
for
11417021
sly-u.5
for
101258363
sly-u.5
for
101254082
sot-r.1
for
102604693
sot-r.1
for
102581781
nta-r.1
for
107795726
nta-r.1
for
107800510
nta-r.1
for
107763154
osa-u.5
for
4334512
osa-u.5
for
4342695
zma-u.5
for
103625791
zma-u.5
for
100283974
zma-u.5
for
100383062
tae-r.2
for
123105549
tae-r.2
for
123062616
tae-r.2
for
123071230
hvu-r.1
for
123444916
hvu-r.1
for
123452881
sbi-r.1
for
8078426
sbi-r.1
for
8081205
sbi-r.1
for
8081204
bdi-r.1
for
100833918
bdi-r.1
for
100822310
cre-r.1
for
CHLRE_01g039250v5


Ortholog ID: 2141
Species cit cit ath ath ath bra bra bra ghi ghi ghi bna bna bna gma gma gma vvi ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC102623889 LOC127899038 AT2G41840 XW6 AT3G57490 LOC103865907 LOC103828995 LOC103857998 LOC107912119 LOC107889330 LOC107886114 LOC106437974 LOC106376707 LOC106388267 LOC100809096 LOC100820352 LOC100810363 LOC100260573 LOC7465143 LOC25482548 LOC11417021 LOC101258363 LOC101254082 LOC102604693 LOC102581781 LOC107795726 LOC107800510 LOC107814537 LOC4334512 LOC4342695 LOC103625791 LOC100283974 LOC100383062 LOC123105549 LOC123062616 LOC123113859 LOC123444916 LOC123452881 LOC8078426 LOC8081205 LOC8081204 LOC100833918 LOC100822310 CHLRE_01g039250v5
Function* 40S ribosomal protein S2-4 40S ribosomal protein S2-4-like Ribosomal protein S5 family protein Ribosomal protein S5 family protein Ribosomal protein S5 family protein 40S ribosomal protein S2-2 40S ribosomal protein S2-2 40S ribosomal protein S2-2 40S ribosomal protein S2-2 40S ribosomal protein S2-4 40S ribosomal protein S2-2 40S ribosomal protein S2-2-like 40S ribosomal protein S2-2 40S ribosomal protein S2-2 40S ribosomal protein S2-4 40S ribosomal protein S2-4 40S ribosomal protein S2-4 40S ribosomal protein S2-4-like 40S ribosomal protein S2-4 40S ribosomal protein S2-4 40S ribosomal protein S2-3 small ribosomal subunit protein uS5w small ribosomal subunit protein uS5x-like 40S ribosomal protein S2-3-like 40S ribosomal protein S2-4-like uncharacterized LOC107795726 uncharacterized LOC107800510 uncharacterized LOC107814537 small ribosomal subunit protein uS5x small ribosomal subunit protein uS5x 40S ribosomal protein S2-3 40S ribosomal protein S2-like 40S ribosomal protein S2-1 40S ribosomal protein S2-3 40S ribosomal protein S2-3 40S ribosomal protein S2-3 40S ribosomal protein S2-3-like 40S ribosomal protein S2-3-like 40S ribosomal protein S2-3 40S ribosomal protein S2-3 40S ribosomal protein S2-3 40S ribosomal protein S2-4 40S ribosomal protein S2-3 ribosomal protein S2;uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma04120 Ubiquitin mediated proteolysis 3
gma04141 Protein processing in endoplasmic reticulum 3
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
cre03013 Nucleocytoplasmic transport 2
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
cre00630 Glyoxylate and dicarboxylate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102623889 127899038 818784 842207 824916 103865907 103828995 103857998 107912119 107889330 107886114 106437974 106376707 106388267 100809096 100820352 100810363 100260573 7465143 25482548 11417021 101258363 101254082 102604693 102581781 107795726 107800510 107814537 4334512 4342695 103625791 100283974 100383062 123105549 123062616 123113859 123444916 123452881 8078426 8081205 8081204 100833918 100822310 5715531
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