ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cit-r.1	102625577	probable peroxygenase 4
ath-u.5	CLO4	Caleosin-related family protein
bra-r.6	103831602	probable peroxygenase 4
bra-r.6	103852674	probable peroxygenase 4
ghi-r.1	121228299	probable peroxygenase 5
ghi-r.1	107961692	probable peroxygenase 5
ghi-r.1	107911556	probable peroxygenase 5
bna-r.1	106449833	probable peroxygenase 4
bna-r.1	106357059	probable peroxygenase 4
gma-u.5	100799842	uncharacterized LOC100799842
gma-u.5	100306686	putative peroxygenase
vvi-u.5	100242160	probable peroxygenase 4
ppo-u.5	7462682	probable peroxygenase 4
ppo-u.5	7482909	probable peroxygenase 4
mtr-u.5	25482527	probable peroxygenase 4
mtr-u.5	25482526	probable peroxygenase 5
sly-u.5	101245874	probable peroxygenase 5
sly-u.5	101266813	probable peroxygenase 5
sly-u.5	101245281	probable peroxygenase 5
sot-r.1	102602601	probable peroxygenase 5
sot-r.1	102580532	probable peroxygenase 5
sot-r.1	102602267	probable peroxygenase 5
nta-r.1	107780594	putative peroxygenase 5
nta-r.1	107765104	putative peroxygenase 4
nta-r.1	107808920	putative peroxygenase 5
osa-u.5	4340665	probable peroxygenase 4
zma-u.5	100217206	ABA-induced protein
tae-r.2	123166823	probable peroxygenase 5
tae-r.2	123166860	probable peroxygenase 5
tae-r.2	123161645	probable peroxygenase 5
hvu-r.1	123406954	probable peroxygenase 5
hvu-r.1	123406956	probable peroxygenase 5
sbi-r.1	8065743	probable peroxygenase 5
sbi-r.1	8065742	probable peroxygenase 4
bdi-r.1	100842731	probable peroxygenase 5

Top 50 coexpressed genes to 102625577 (cit-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102625577 (cit-r.1 coexpression data)

CoexMap"102625577"

[Cytoscape]

Annotation

functional annotation

KEGG

cit00073 [list] [network] Cutin, suberine and wax biosynthesis (32 genes)

GO BP

GO CC

GO MF

GO:0005509 [list] [network] calcium ion binding	(209 genes)	IEA
GO:0004497 [list] [network] monooxygenase activity	(344 genes)	IEA

Protein

XP_006469237.1 [sequence] [blastp]
XP_006469238.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, cyto 3, cyto_nucl 3, pero 1, cysk_nucl 1, cyto_E.R. 1	(predict for XP_006469237.1)
cyto 4, nucl 3, pero 1, cysk_nucl 1	(predict for XP_006469238.1)

Subcellular
localization
TargetP

other 7, chlo 4	(predict for XP_006469237.1)
other 7, chlo 4	(predict for XP_006469238.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102625577	ath-u.5 for CLO4	bra-r.6 for 103831602	bra-r.6 for 103852674	ghi-r.1 for 121228299	ghi-r.1 for 107961692	ghi-r.1 for 107911556	bna-r.1 for 106449833	bna-r.1 for 106357059	gma-u.5 for 100799842	gma-u.5 for 100306686	vvi-u.5 for 100242160	ppo-u.5 for 7462682	ppo-u.5 for 7482909	mtr-u.5 for 25482527	mtr-u.5 for 25482526	sly-u.5 for 101245874	sly-u.5 for 101266813	sly-u.5 for 101245281	sot-r.1 for 102602601	sot-r.1 for 102580532	sot-r.1 for 102602267	nta-r.1 for 107780594	nta-r.1 for 107765104	nta-r.1 for 107808920	osa-u.5 for 4340665	zma-u.5 for 100217206	tae-r.2 for 123166823	tae-r.2 for 123166860	tae-r.2 for 123161645	hvu-r.1 for 123406954	hvu-r.1 for 123406956	sbi-r.1 for 8065743	sbi-r.1 for 8065742	bdi-r.1 for 100842731

Ortholog

Ortholog ID: 2679

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

CLO4

Function^*

probable peroxygenase 4

Caleosin-related family protein

probable peroxygenase 4

probable peroxygenase 5

probable peroxygenase 4

uncharacterized LOC100799842

probable peroxygenase 4

probable peroxygenase 5

putative peroxygenase 5

putative peroxygenase 4

putative peroxygenase 5

probable peroxygenase 4

ABA-induced protein

probable peroxygenase 5

probable peroxygenase 4

probable peroxygenase 5

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	3
bra00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	4
ghi00073	Cutin, suberine and wax biosynthesis	2
ghi00230	Purine metabolism	2
ghi00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00941	Flavonoid biosynthesis	3
ghi04712	Circadian rhythm - plant	3
ghi00195	Photosynthesis	2
ghi00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00073	Cutin, suberine and wax biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00073	Cutin, suberine and wax biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00073	Cutin, suberine and wax biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00630	Glyoxylate and dicarboxylate metabolism	3
gma00640	Propanoate metabolism	3
gma01200	Carbon metabolism	3
gma00052	Galactose metabolism	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	2
ppo00270	Cysteine and methionine metabolism	2
ppo00053	Ascorbate and aldarate metabolism	2
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	3
nta00040	Pentose and glucuronate interconversions	2
nta04142	Lysosome	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	3
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	8
tae04148	Efferocytosis	4
tae00500	Starch and sucrose metabolism	3
tae04144	Endocytosis	3
tae04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	8
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	8
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00730	Thiamine metabolism	3
sbi00900	Terpenoid backbone biosynthesis	3
sbi04712	Circadian rhythm - plant	2
sbi00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00562	Inositol phosphate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

102625577

843404

103831602

103830877

121228299

107921238

107946288

106357059

106357064

125576324

100799842

100242160

7462682

7482909

25482527

25482526

101245874

101266813

101245281

102602601

102580532

102602267

107780594

107765104

107808920

4340665

100217206

123161645

123150650

123159611

123406954

123406956

8065743

8065742

100842731

The preparation time of this page was 0.5 [sec].


Species	cit	ath	bra	ghi	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	1	2	3	2	2	1	2	2	3	3	3	1	1	3	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102625577 (cit-r.1 coexpression data)

Top 50 enrichment test to 102625577 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**