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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102627533   F-box protein At3g12350 
 ath-u.5   AT3G12350   F-box family protein 
 bra-r.6   103858460   F-box protein At3g12350 
 ghi-r.1   107958194   F-box protein At3g12350 
 ghi-r.1   107957907   F-box protein At3g12350 
 bna-r.1   106388431   F-box protein At3g12350 
 bna-r.1   106388461   F-box protein At3g12350 
 gma-u.5   100799602   F-box protein At3g12350 
 gma-u.5   100779297   F-box protein At3g12350 
 vvi-u.5   100245525   F-box protein At3g12350 
 ppo-u.5   7472655   F-box protein At3g12350 
 mtr-u.5   11411541   F-box protein At3g12350 
 sly-u.5   101257559   F-box protein At3g12350 
 sot-r.1   102588172   F-box protein At3g12350 
 nta-r.1   107783880   F-box protein At3g12350 
 nta-r.1   107762187   F-box protein At3g12350-like 
 osa-u.5   4352322   F-box protein At3g12350 
 zma-u.5   100192530   F-box protein 
 tae-r.2   123119894   F-box protein At3g12350 
 tae-r.2   123110876   F-box protein At3g12350 
 tae-r.2   123102713   F-box protein At3g12350 
 hvu-r.1   123400139   F-box protein At3g12350 
 sbi-r.1   8064603   F-box protein At3g12350 
 bdi-r.1   100828016   F-box protein At3g12350 

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Top 50 coexpressed genes to 102627533 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102627533 (cit-r.1 coexpression data)

CoexMap"102627533"


citLOC102627533 | Entrez gene ID : 102627533    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 2 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009740 [list] [network] gibberellic acid mediated signaling pathway  (7 genes)  IEA  
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (49 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (45 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006472307.2 [sequence] [blastp]
XP_024952240.2 [sequence] [blastp]
XP_052297765.1 [sequence] [blastp]
XP_052297766.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006472307.2)
nucl 6,  cyto 1,  cysk 1  (predict for XP_024952240.2)
nucl 9  (predict for XP_052297765.1)
nucl 10  (predict for XP_052297766.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006472307.2)
other 8  (predict for XP_024952240.2)
other 8  (predict for XP_052297765.1)
other 8  (predict for XP_052297766.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102627533
ath-u.5
for
AT3G12350
bra-r.6
for
103858460
ghi-r.1
for
107958194
ghi-r.1
for
107957907
bna-r.1
for
106388431
bna-r.1
for
106388461
gma-u.5
for
100799602
gma-u.5
for
100779297
vvi-u.5
for
100245525
ppo-u.5
for
7472655
mtr-u.5
for
11411541
sly-u.5
for
101257559
sot-r.1
for
102588172
nta-r.1
for
107783880
nta-r.1
for
107762187
osa-u.5
for
4352322
zma-u.5
for
100192530
tae-r.2
for
123119894
tae-r.2
for
123110876
tae-r.2
for
123102713
hvu-r.1
for
123400139
sbi-r.1
for
8064603
bdi-r.1
for
100828016


Ortholog ID: 10761
Species cit ath bra ghi ghi bna bna gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC102627533 AT3G12350 LOC103858460 LOC107958194 LOC107957907 LOC106388431 LOC106388461 LOC100799602 LOC100779297 LOC100245525 LOC7472655 LOC11411541 LOC101257559 LOC102588172 LOC107783880 LOC107762187 LOC4352322 LOC100192530 LOC123119894 LOC123110876 LOC123102713 LOC123400139 LOC8064603 LOC100828016
Function* F-box protein At3g12350 F-box family protein F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350-like F-box protein At3g12350 F-box protein F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350 F-box protein At3g12350
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 6
ghi00566 Sulfoquinovose metabolism 4
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 5
ghi00566 Sulfoquinovose metabolism 4
ghi04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00561 Glycerolipid metabolism 2
osa00566 Sulfoquinovose metabolism 2
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00740 Riboflavin metabolism 2
zma04142 Lysosome 2
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 3
sbi00561 Glycerolipid metabolism 2
sbi00566 Sulfoquinovose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102627533 820413 103858460 107958194 107957907 106388431 106388461 100799602 100779297 100245525 7472655 11411541 101257559 102588172 107783880 107762187 4352322 100192530 123119894 123110876 123102713 123400139 8064603 100828016
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