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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102628100   DExH-box ATP-dependent RNA helicase DExH3 
 ath-u.5   AT2G01130   DEA(D/H)-box RNA helicase family protein 
 ath-u.5   AT1G48650   DEA(D/H)-box RNA helicase family protein 
 gma-u.5   100808902   DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 gma-u.5   100806141   DExH-box ATP-dependent RNA helicase DExH3 
 gma-u.5   100798684   DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 vvi-u.5   100244105   DExH-box ATP-dependent RNA helicase DExH3 
 vvi-u.5   100264518   DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 ppo-u.5   7453895   DExH-box ATP-dependent RNA helicase DExH3 
 ppo-u.5   7459805   DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 mtr-u.5   11410150   DExH-box ATP-dependent RNA helicase DExH3 
 mtr-u.5   25485451   DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 sly-u.5   101263393   DExH-box ATP-dependent RNA helicase DExH3 
 sly-u.5   101261705   DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 osa-u.5   4326075   DExH-box ATP-dependent RNA helicase DExH3 
 zma-u.5   103649879   DExH-box ATP-dependent RNA helicase DExH3 

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Top 50 coexpressed genes to 102628100 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102628100 (cit-r.1 coexpression data)

CoexMap"102628100"


citLOC102628100 | Entrez gene ID : 102628100    
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 2 3 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03018 [list] [network] RNA degradation (98 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO:0005622 [list] [network] intracellular anatomical structure  (6549 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1864 genes)  IEA  
Protein XP_006490711.1 [sequence] [blastp]
XP_006490712.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  chlo 4,  E.R. 1,  pero 1  (predict for XP_006490711.1)
plas 7,  nucl 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._vacu 1  (predict for XP_006490712.1)
Subcellular
localization
TargetP
other 3  (predict for XP_006490711.1)
other 8,  chlo 3  (predict for XP_006490712.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102628100
ath-u.5
for
AT2G01130
ath-u.5
for
AT1G48650
gma-u.5
for
100808902
gma-u.5
for
100806141
gma-u.5
for
100798684
vvi-u.5
for
100244105
vvi-u.5
for
100264518
ppo-u.5
for
7453895
ppo-u.5
for
7459805
mtr-u.5
for
11410150
mtr-u.5
for
25485451
sly-u.5
for
101263393
sly-u.5
for
101261705
osa-u.5
for
4326075
zma-u.5
for
103649879


Ortholog ID: 4849
Species cit cit ath ath bra bra ghi ghi bna bna gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC102628100 LOC102617632 AT2G01130 AT1G48650 LOC103827605 LOC103871455 LOC107886710 LOC107904655 LOC106382089 LOC111216220 LOC100808902 LOC100798684 LOC100264518 LOC100244105 LOC7453895 LOC7459805 LOC25485451 LOC11410150 LOC101263393 LOC101261705 LOC102604132 LOC102586003 LOC107763499 LOC107759510 LOC4326075 LOC103649879 LOC123059825 LOC123068291 LOC123442414 LOC8070438 LOC100830414
Function* DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DEA(D/H)-box RNA helicase family protein DEA(D/H)-box RNA helicase family protein DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial ATP-dependent RNA helicase DHX36 ATP-dependent RNA helicase DHX36 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3-like DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03018 RNA degradation 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi00480 Glutathione metabolism 2
ghi00196 Photosynthesis - antenna proteins 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102628100 102617632 814642 841287 103827605 103871455 107886710 107904655 106382089 111216220 100808902 100798684 100264518 100244105 7453895 7459805 25485451 11410150 101263393 101261705 102604132 102586003 107763499 107759510 4326075 103649879 123059825 123068291 123442414 8070438 100830414
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