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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102629154   F-box/LRR-repeat protein 3 
 ath-u.5   AT5G27920   F-box family protein 
 bra-r.6   103837159   F-box/LRR-repeat protein 3 
 ghi-r.1   107887269   F-box/LRR-repeat protein 3 
 ghi-r.1   107927282   F-box/LRR-repeat protein 3 
 bna-r.1   106365862   F-box/LRR-repeat protein 3-like 
 bna-r.1   106434679   F-box/LRR-repeat protein 3-like 
 bna-r.1   106402223   F-box/LRR-repeat protein 3-like 
 gma-u.5   100810033   F-box/LRR-repeat protein 3 
 gma-u.5   100802904   F-box/LRR-repeat protein 3 
 vvi-u.5   100249393   F-box/LRR-repeat protein 3 
 ppo-u.5   7478924   F-box/LRR-repeat protein 3 
 ppo-u.5   18098637   F-box/LRR-repeat protein 3 
 mtr-u.5   11434617   F-box/LRR-repeat protein 3 
 sly-u.5   101261163   F-box/LRR-repeat protein 3 
 sot-r.1   102587135   F-box/LRR-repeat protein 3 
 nta-r.1   107760400   F-box/LRR-repeat protein 3-like 
 nta-r.1   107780111   F-box/LRR-repeat protein 3 
 osa-u.5   4352473   F-box/LRR-repeat protein 3 
 zma-u.5   103650561   F-box/LRR-repeat protein 3-like 
 zma-u.5   103640946   F-box/LRR-repeat protein 3 
 tae-r.2   123110791   F-box/LRR-repeat protein 3 
 tae-r.2   123119787   F-box/LRR-repeat protein 3 
 tae-r.2   123102606   F-box/LRR-repeat protein 3 
 hvu-r.1   123451854   F-box/LRR-repeat protein 3 
 sbi-r.1   8068815   F-box/LRR-repeat protein 3 
 sbi-r.1   8070182   F-box/LRR-repeat protein 3 
 bdi-r.1   100845110   F-box/LRR-repeat protein 3 

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Top 50 coexpressed genes to 102629154 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102629154 (cit-r.1 coexpression data)

CoexMap"102629154"


citLOC102629154 | Entrez gene ID : 102629154    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 3 2 1 2 1 1 1 2 1 2 3 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (49 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (45 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006472138.2 [sequence] [blastp]
XP_006472139.2 [sequence] [blastp]
XP_052298281.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 2,  nucl_plas 2  (predict for XP_006472138.2)
nucl 4,  cyto 3,  chlo 2,  nucl_plas 2  (predict for XP_006472139.2)
nucl 4,  cyto 3,  chlo 2,  nucl_plas 2  (predict for XP_052298281.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006472138.2)
other 9  (predict for XP_006472139.2)
other 9  (predict for XP_052298281.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102629154
ath-u.5
for
AT5G27920
bra-r.6
for
103837159
ghi-r.1
for
107887269
ghi-r.1
for
107927282
bna-r.1
for
106365862
bna-r.1
for
106434679
bna-r.1
for
106402223
gma-u.5
for
100810033
gma-u.5
for
100802904
vvi-u.5
for
100249393
ppo-u.5
for
7478924
ppo-u.5
for
18098637
mtr-u.5
for
11434617
sly-u.5
for
101261163
sot-r.1
for
102587135
nta-r.1
for
107760400
nta-r.1
for
107780111
osa-u.5
for
4352473
zma-u.5
for
103650561
zma-u.5
for
103640946
tae-r.2
for
123110791
tae-r.2
for
123119787
tae-r.2
for
123102606
hvu-r.1
for
123451854
sbi-r.1
for
8068815
sbi-r.1
for
8070182
bdi-r.1
for
100845110


Ortholog ID: 6980
Species cit ath bra ghi ghi bna bna bna gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi sbi bdi
Symbol LOC102629154 AT5G27920 LOC103837159 LOC107887269 LOC107927282 LOC106365862 LOC106434679 LOC106402223 LOC100810033 LOC100802904 LOC100249393 LOC7478924 LOC18098637 LOC11434617 LOC101261163 LOC102587135 LOC107760400 LOC107780111 LOC4352473 LOC103650561 LOC103640946 LOC123110791 LOC123119787 LOC123102606 LOC123451854 LOC8068815 LOC8070182 LOC100845110
Function* F-box/LRR-repeat protein 3 F-box family protein F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3-like F-box/LRR-repeat protein 3-like F-box/LRR-repeat protein 3-like F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3-like F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3-like F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
ath00053 Ascorbate and aldarate metabolism 2
ath00562 Inositol phosphate metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01200 Carbon metabolism 2
bra00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 2
bna04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo00514 Other types of O-glycan biosynthesis 2
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
ppo04016 MAPK signaling pathway - plant 5
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00620 Pyruvate metabolism 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00910 Nitrogen metabolism 9
tae01310 Nitrogen cycle 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00910 Nitrogen metabolism 4
tae01310 Nitrogen cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00910 Nitrogen metabolism 4
tae01310 Nitrogen cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102629154 832858 103837159 107887269 107927282 106365862 106434679 106402223 100810033 100802904 100249393 7478924 18098637 11434617 101261163 102587135 107760400 107780111 4352473 103650561 103640946 123110791 123119787 123102606 123451854 8068815 8070182 100845110
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