ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cit-r.1	102629485	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
cit-r.1	127901296	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
cit-r.1	127903133	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.3
ath-u.5	AT1G66910	Protein kinase superfamily protein
ath-u.5	AT1G66920	Protein kinase superfamily protein
bra-r.6	103850109	PR5-like receptor kinase
bra-r.6	103831142	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5
ghi-r.1	107916689	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4
bna-r.1	106432068	PR5-like receptor kinase
bna-r.1	106414720	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
bna-r.1	106403749	PR5-like receptor kinase
gma-u.5	100794505	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4
gma-u.5	100796618	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
gma-u.5	100786495	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5
vvi-u.5	100241191	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4
mtr-u.5	25496804	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5
mtr-u.5	25496801	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4
sly-u.5	101268684	rust resistance kinase Lr10-like
sly-u.5	101243709	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
sly-u.5	101263961	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
sot-r.1	102578953	probable receptor-like protein kinase At1g67000
sot-r.1	102595710	probable receptor-like protein kinase At5g39020
nta-r.1	107765997	rust resistance kinase Lr10-like
nta-r.1	107782304	rust resistance kinase Lr10-like
nta-r.1	107796072	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
osa-u.5	107281842	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
osa-u.5	107278584	uncharacterized LOC107278584
zma-u.5	103636195	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.3
zma-u.5	100279755	uncharacterized LOC100279755
zma-u.5	103651811	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
hvu-r.1	123442582	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5
hvu-r.1	123442576	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4
sbi-r.1	8073335	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4
sbi-r.1	8068701	chitin elicitor-binding protein
sbi-r.1	8063089	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4
bdi-r.1	100837475	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
bdi-r.1	100835928	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4

Top 50 coexpressed genes to 102629485 (cit-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102629485 (cit-r.1 coexpression data)

CoexMap"102629485"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006468 [list] [network] protein phosphorylation

(1088 genes)

IEA

GO CC

GO MF

GO:0030247 [list] [network] polysaccharide binding	(64 genes)	IEA
GO:0004672 [list] [network] protein kinase activity	(1122 genes)	IEA
GO:0005524 [list] [network] ATP binding	(1864 genes)	IEA

Protein

XP_006482223.1 [sequence] [blastp]
XP_052299195.1 [sequence] [blastp]
XP_052299196.1 [sequence] [blastp]
XP_052299197.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, golg_plas 4, vacu 1, golg 1	(predict for XP_006482223.1)
plas 6, golg_plas 4, golg 2	(predict for XP_052299195.1)
plas 6, golg_plas 4, golg 2	(predict for XP_052299196.1)
plas 6, golg_plas 4, golg 2	(predict for XP_052299197.1)

Subcellular
localization
TargetP

scret 9	(predict for XP_006482223.1)
scret 8	(predict for XP_052299195.1)
scret 8	(predict for XP_052299196.1)
scret 8	(predict for XP_052299197.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102629485	cit-r.1 for 127901296	cit-r.1 for 127903133	ath-u.5 for AT1G66910	ath-u.5 for AT1G66920	bra-r.6 for 103850109	bra-r.6 for 103831142	ghi-r.1 for 107916689	bna-r.1 for 106432068	bna-r.1 for 106414720	bna-r.1 for 106403749	gma-u.5 for 100794505	gma-u.5 for 100796618	gma-u.5 for 100786495	vvi-u.5 for 100241191	mtr-u.5 for 25496804	mtr-u.5 for 25496801	sly-u.5 for 101268684	sly-u.5 for 101243709	sly-u.5 for 101263961	sot-r.1 for 102578953	sot-r.1 for 102595710	nta-r.1 for 107765997	nta-r.1 for 107782304	nta-r.1 for 107796072	osa-u.5 for 107281842	osa-u.5 for 107278584	zma-u.5 for 103636195	zma-u.5 for 100279755	zma-u.5 for 103651811	hvu-r.1 for 123442582	hvu-r.1 for 123442576	sbi-r.1 for 8073335	sbi-r.1 for 8068701	sbi-r.1 for 8063089	bdi-r.1 for 100837475	bdi-r.1 for 100835928

Ortholog

Ortholog ID: 169

Species

cit

ath

bra

ghi

bna

gma

vvi

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*