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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102629579   uncharacterized LOC102629579 
 cit-r.1   102616602   uncharacterized LOC102616602 
 ath-u.5   AT1G14180   RING/U-box superfamily protein 
 bra-r.6   103872114   uncharacterized LOC103872114 
 bra-r.6   103843189   uncharacterized LOC103843189 
 ghi-r.1   107892245   uncharacterized LOC107892245 
 ghi-r.1   107920285   uncharacterized LOC107920285 
 ghi-r.1   107961883   uncharacterized LOC107961883 
 bna-r.1   106397640   uncharacterized LOC106397640 
 bna-r.1   106413900   uncharacterized LOC106413900 
 gma-u.5   100789831   uncharacterized LOC100789831 
 gma-u.5   100779481   uncharacterized LOC100779481 
 vvi-u.5   100247068   uncharacterized LOC100247068 
 ppo-u.5   7482361   uncharacterized LOC7482361 
 ppo-u.5   7469868   uncharacterized LOC7469868 
 mtr-u.5   11424788   uncharacterized LOC11424788 
 sly-u.5   101246630   uncharacterized LOC101246630 
 sot-r.1   102606114   uncharacterized LOC102606114 
 nta-r.1   107808612   uncharacterized LOC107808612 
 nta-r.1   107807535   uncharacterized LOC107807535 
 osa-u.5   4332711   uncharacterized LOC4332711 
 osa-u.5   4348584   uncharacterized LOC4348584 
 zma-u.5   100383259   uncharacterized LOC100383259 
 zma-u.5   100279533   uncharacterized LOC100279533 
 zma-u.5   100275703   putative RING zinc finger domain superfamily protein 
 tae-r.2   123138214   uncharacterized LOC123138214 
 tae-r.2   123145474   uncharacterized LOC123145474 
 tae-r.2   123128362   uncharacterized LOC123128362 
 hvu-r.1   123401243   uncharacterized LOC123401243 
 sbi-r.1   8084564   uncharacterized LOC8084564 
 sbi-r.1   8057788   uncharacterized LOC8057788 
 bdi-r.1   100830430   uncharacterized LOC100830430 
 bdi-r.1   100841348   uncharacterized LOC100841348 

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Top 50 coexpressed genes to 102629579 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102629579 (cit-r.1 coexpression data)

CoexMap"102629579"


citLOC102629579 | Entrez gene ID : 102629579    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 2 2 1 2 1 1 1 2 2 3 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004523 [list] [network] RNA-DNA hybrid ribonuclease activity  (137 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3051 genes)  IEA  
Protein XP_052292040.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for XP_052292040.1)
Subcellular
localization
TargetP
other 8  (predict for XP_052292040.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102629579
cit-r.1
for
102616602
ath-u.5
for
AT1G14180
bra-r.6
for
103872114
bra-r.6
for
103843189
ghi-r.1
for
107892245
ghi-r.1
for
107920285
ghi-r.1
for
107961883
bna-r.1
for
106397640
bna-r.1
for
106413900
gma-u.5
for
100789831
gma-u.5
for
100779481
vvi-u.5
for
100247068
ppo-u.5
for
7482361
ppo-u.5
for
7469868
mtr-u.5
for
11424788
sly-u.5
for
101246630
sot-r.1
for
102606114
nta-r.1
for
107808612
nta-r.1
for
107807535
osa-u.5
for
4332711
osa-u.5
for
4348584
zma-u.5
for
100383259
zma-u.5
for
100279533
zma-u.5
for
100275703
tae-r.2
for
123138214
tae-r.2
for
123145474
tae-r.2
for
123128362
hvu-r.1
for
123401243
sbi-r.1
for
8084564
sbi-r.1
for
8057788
bdi-r.1
for
100830430
bdi-r.1
for
100841348


Ortholog ID: 6125
Species cit cit ath bra bra ghi ghi ghi bna bna gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi
Symbol LOC102629579 LOC102616602 AT1G14180 LOC103872114 LOC103843189 LOC107892245 LOC107920285 LOC107961883 LOC106397640 LOC106413900 LOC100789831 LOC100779481 LOC100247068 LOC7482361 LOC7469868 LOC11424788 LOC101246630 LOC102606114 LOC107808612 LOC107807535 LOC4332711 LOC4348584 LOC100383259 LOC100279533 LOC100275703 LOC123138214 LOC123145474 LOC123128362 LOC123401243 LOC8084564 LOC8057788 LOC100830430 LOC100841348
Function* uncharacterized LOC102629579 uncharacterized LOC102616602 RING/U-box superfamily protein uncharacterized LOC103872114 uncharacterized LOC103843189 uncharacterized LOC107892245 uncharacterized LOC107920285 uncharacterized LOC107961883 uncharacterized LOC106397640 uncharacterized LOC106413900 uncharacterized LOC100789831 uncharacterized LOC100779481 uncharacterized LOC100247068 uncharacterized LOC7482361 uncharacterized LOC7469868 uncharacterized LOC11424788 uncharacterized LOC101246630 uncharacterized LOC102606114 uncharacterized LOC107808612 uncharacterized LOC107807535 uncharacterized LOC4332711 uncharacterized LOC4348584 uncharacterized LOC100383259 uncharacterized LOC100279533 putative RING zinc finger domain superfamily protein uncharacterized LOC123138214 uncharacterized LOC123145474 uncharacterized LOC123128362 uncharacterized LOC123401243 uncharacterized LOC8084564 uncharacterized LOC8057788 uncharacterized LOC100830430 uncharacterized LOC100841348
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
ppo04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03083 Polycomb repressive complex 2
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
bdi00190 Oxidative phosphorylation 3
bdi04145 Phagosome 3
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102629579 102616602 837977 103872114 103843189 107892245 107920285 107961883 106397640 106413900 100789831 100779481 100247068 7482361 7469868 11424788 101246630 102606114 107808612 107807535 4332711 4348584 100383259 100279533 100275703 123138214 123145474 123128362 123401243 8084564 8057788 100830430 100841348
The preparation time of this page was 1.7 [sec].