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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102631015   pentatricopeptide repeat-containing protein At5g42310, chloroplastic 
 bra-r.6   103849169   putative pentatricopeptide repeat-containing protein At5g36300 
 ghi-r.1   107899724   pentatricopeptide repeat-containing protein CRP1, chloroplastic 
 ghi-r.1   107957042   pentatricopeptide repeat-containing protein CRP1, chloroplastic 
 bna-r.1   106376637   putative pentatricopeptide repeat-containing protein At5g36300 
 bna-r.1   106411342   putative pentatricopeptide repeat-containing protein At5g36300 
 gma-u.5   100799638   pentatricopeptide repeat-containing protein At5g42310, chloroplastic 
 vvi-u.5   100257976   pentatricopeptide repeat-containing protein CRP1, chloroplastic 
 sly-u.5   101260289   putative pentatricopeptide repeat-containing protein At5g36300 
 sot-r.1   102590662   pentatricopeptide repeat-containing protein At5g42310, mitochondrial 
 nta-r.1   107819884   uncharacterized LOC107819884 
 nta-r.1   107827950   uncharacterized LOC107827950 

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Top 50 coexpressed genes to 102631015 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102631015 (cit-r.1 coexpression data)

CoexMap"102631015"


citLOC102631015 | Entrez gene ID : 102631015      
Species cit bra ghi bna gma vvi sly sot nta zma cre ppo sbi ath tae mtr osa hvu bdi
Paralog 1 1 2 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006491815.1 [sequence] [blastp]
XP_052299159.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  plas 1,  extr 1,  E.R. 1,  E.R._plas 1  (predict for XP_006491815.1)
chlo 7,  nucl 1,  plas 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._plas 1  (predict for XP_052299159.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_006491815.1)
chlo 7  (predict for XP_052299159.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102631015
bra-r.6
for
103849169
ghi-r.1
for
107899724
ghi-r.1
for
107957042
bna-r.1
for
106376637
bna-r.1
for
106411342
gma-u.5
for
100799638
vvi-u.5
for
100257976
sly-u.5
for
101260289
sot-r.1
for
102590662
nta-r.1
for
107819884
nta-r.1
for
107827950


Ortholog ID: 13169
Species cit bra ghi ghi bna bna gma vvi sly sot nta nta
Symbol LOC102631015 LOC103849169 LOC107899724 LOC107957042 LOC106376637 LOC106411342 LOC100799638 LOC100257976 LOC101260289 LOC102590662 LOC107819884 LOC107827950
Function* pentatricopeptide repeat-containing protein At5g42310, chloroplastic putative pentatricopeptide repeat-containing protein At5g36300 pentatricopeptide repeat-containing protein CRP1, chloroplastic pentatricopeptide repeat-containing protein CRP1, chloroplastic putative pentatricopeptide repeat-containing protein At5g36300 putative pentatricopeptide repeat-containing protein At5g36300 pentatricopeptide repeat-containing protein At5g42310, chloroplastic pentatricopeptide repeat-containing protein CRP1, chloroplastic putative pentatricopeptide repeat-containing protein At5g36300 pentatricopeptide repeat-containing protein At5g42310, mitochondrial uncharacterized LOC107819884 uncharacterized LOC107827950
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102631015 103849169 107899724 107957042 106376637 106411342 100799638 100257976 101260289 102590662 107819884 107827950
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