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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102631396   U-box domain-containing protein 27 
 cit-r.1   102626581   U-box domain-containing protein 29 
 ath-u.5   PUB29   plant U-box 29 
 ath-u.5   AT5G09800   ARM repeat superfamily protein 
 ath-u.5   CMPG2   CYS, MET, PRO, and GLY protein 2 
 bra-r.6   103859764   U-box domain-containing protein 29-like 
 bra-r.6   103873891   U-box domain-containing protein 27 
 bra-r.6   103869533   U-box domain-containing protein 29 
 ghi-r.1   107922734   U-box domain-containing protein 27 
 ghi-r.1   107915887   U-box domain-containing protein 29 
 ghi-r.1   107908035   U-box domain-containing protein 29 
 bna-r.1   106348028   U-box domain-containing protein 27 
 bna-r.1   111198655   U-box domain-containing protein 27 
 bna-r.1   106385822   U-box domain-containing protein 29 
 gma-u.5   100786235   U-box domain-containing protein 28 
 gma-u.5   100781196   U-box domain-containing protein 27 
 gma-u.5   100801033   U-box domain-containing protein 27 
 vvi-u.5   100264434   U-box domain-containing protein 27 
 vvi-u.5   100251262   U-box domain-containing protein 27 
 ppo-u.5   18099007   U-box domain-containing protein 28 
 ppo-u.5   7466408   U-box domain-containing protein 29 
 ppo-u.5   7485055   U-box domain-containing protein 28 
 mtr-u.5   11426092   U-box domain-containing protein 27 
 mtr-u.5   11428633   U-box domain-containing protein 27 
 sly-u.5   101261019   U-box domain-containing protein 28-like 
 sly-u.5   101243947   U-box domain-containing protein 27-like 
 sot-r.1   102603918   U-box domain-containing protein 28 
 sot-r.1   102585949   U-box domain-containing protein 27 
 nta-r.1   107824931   U-box domain-containing protein 28 
 nta-r.1   107797581   U-box domain-containing protein 27-like 
 nta-r.1   107794587   U-box domain-containing protein 27-like 
 osa-u.5   4329591   U-box domain-containing protein 27 
 osa-u.5   4335817   U-box domain-containing protein 29 
 zma-u.5   100280896   U-box domain containing protein 
 zma-u.5   103653608   U-box domain-containing protein 27 
 zma-u.5   100284248   photoperiod responsive protein 
 tae-r.2   123189185   U-box domain-containing protein 27 
 tae-r.2   123057751   U-box domain-containing protein 29 
 tae-r.2   123053271   U-box domain-containing protein 27 
 hvu-r.1   123426698   U-box domain-containing protein 27-like 
 sbi-r.1   8077583   U-box domain-containing protein 27 
 sbi-r.1   8061028   U-box domain-containing protein 27 
 bdi-r.1   100826055   U-box domain-containing protein 27 

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Top 50 coexpressed genes to 102631396 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102631396 (cit-r.1 coexpression data)

CoexMap"102631396"


citLOC102631396 | Entrez gene ID : 102631396    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 3 3 3 3 2 3 2 2 2 3 2 3 3 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (265 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (137 genes)  IEA  
Protein XP_006464606.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  chlo 1,  pero 1  (predict for XP_006464606.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006464606.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102631396
cit-r.1
for
102626581
ath-u.5
for
PUB29
ath-u.5
for
AT5G09800
ath-u.5
for
CMPG2
bra-r.6
for
103859764
bra-r.6
for
103873891
bra-r.6
for
103869533
ghi-r.1
for
107922734
ghi-r.1
for
107915887
ghi-r.1
for
107908035
bna-r.1
for
106348028
bna-r.1
for
111198655
bna-r.1
for
106385822
gma-u.5
for
100786235
gma-u.5
for
100781196
gma-u.5
for
100801033
vvi-u.5
for
100264434
vvi-u.5
for
100251262
ppo-u.5
for
18099007
ppo-u.5
for
7466408
ppo-u.5
for
7485055
mtr-u.5
for
11426092
mtr-u.5
for
11428633
sly-u.5
for
101261019
sly-u.5
for
101243947
sot-r.1
for
102603918
sot-r.1
for
102585949
nta-r.1
for
107824931
nta-r.1
for
107797581
nta-r.1
for
107794587
osa-u.5
for
4329591
osa-u.5
for
4335817
zma-u.5
for
100280896
zma-u.5
for
103653608
zma-u.5
for
100284248
tae-r.2
for
123189185
tae-r.2
for
123057751
tae-r.2
for
123053271
hvu-r.1
for
123426698
sbi-r.1
for
8077583
sbi-r.1
for
8061028
bdi-r.1
for
100826055


Ortholog ID: 2410
Species cit cit ath ath ath bra bra bra ghi ghi ghi bna bna bna gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi
Symbol LOC102631396 LOC102626581 PUB29 AT5G09800 CMPG2 LOC103859764 LOC103873891 LOC103869533 LOC107922734 LOC107913573 LOC107910440 LOC106411569 LOC106444107 LOC106379922 LOC100786235 LOC100801033 LOC100811783 LOC100264434 LOC100251262 LOC18099007 LOC7466408 LOC7485055 LOC11426092 LOC11428633 LOC101261019 LOC101243947 LOC102603918 LOC102585949 LOC107824931 LOC107797581 LOC107778942 LOC4329591 LOC4335817 LOC100280896 LOC103653608 LOC100284248 LOC123057751 LOC123045441 LOC123182167 LOC123426698 LOC8077583 LOC8061028 LOC100826055
Function* U-box domain-containing protein 27 U-box domain-containing protein 29 plant U-box 29 ARM repeat superfamily protein CYS, MET, PRO, and GLY protein 2 U-box domain-containing protein 29-like U-box domain-containing protein 27 U-box domain-containing protein 29 U-box domain-containing protein 27 U-box domain-containing protein 27 U-box domain-containing protein 29 U-box domain-containing protein 29-like U-box domain-containing protein 29-like U-box domain-containing protein 29 U-box domain-containing protein 28 U-box domain-containing protein 27 U-box domain-containing protein 28 U-box domain-containing protein 27 U-box domain-containing protein 27 U-box domain-containing protein 28 U-box domain-containing protein 29 U-box domain-containing protein 28 U-box domain-containing protein 27 U-box domain-containing protein 27 U-box domain-containing protein 28-like U-box domain-containing protein 27-like U-box domain-containing protein 28 U-box domain-containing protein 27 U-box domain-containing protein 28 U-box domain-containing protein 27-like U-box domain-containing protein 27-like U-box domain-containing protein 27 U-box domain-containing protein 29 U-box domain containing protein U-box domain-containing protein 27 photoperiod responsive protein U-box domain-containing protein 29 U-box domain-containing protein 27 U-box domain-containing protein 29 U-box domain-containing protein 27-like U-box domain-containing protein 27 U-box domain-containing protein 27 U-box domain-containing protein 27
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 6
cit00460 Cyanoamino acid metabolism 3
cit00966 Glucosinolate biosynthesis 3
cit01210 2-Oxocarboxylic acid metabolism 3
cit00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
bra04075 Plant hormone signal transduction 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102631396 102626581 821402 830840 836587 103859764 103873891 103869533 107922734 107913573 107910440 106411569 106444107 106379922 100786235 100801033 100811783 100264434 100251262 18099007 7466408 7485055 11426092 11428633 101261019 101243947 102603918 102585949 107824931 107797581 107778942 4329591 4335817 100280896 103653608 100284248 123057751 123045441 123182167 123426698 8077583 8061028 100826055
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