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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   1-3-1B   syringolide-induced protein 1-3-1B 
 gma-u.5   1-3-1A   syringolide-induced protein 1-3-1A 
 mtr-u.5   25485559   transcription factor DIVARICATA 
 ppo-u.5   7469525   transcription factor SRM1 
 ppo-u.5   7467960   transcription factor SRM1 
 ath-u.5   AT5G04760   Duplicated homeodomain-like superfamily protein 
 bra-r.6   103850559   transcription factor DIVARICATA 
 bra-r.6   103855582   transcription factor DIVARICATA 
 vvi-u.5   100263868   transcription factor SRM1 
 ghi-r.1   107889182   transcription factor SRM1 
 ghi-r.1   107901859   transcription factor DIVARICATA 
 ghi-r.1   107891532   transcription factor SRM1 
 bna-r.1   111203881   transcription factor DIVARICATA-like 
 bna-r.1   106433113   transcription factor DIVARICATA 
 bna-r.1   106358534   transcription factor DIVARICATA-like 
 cit-r.1   102624360   transcription factor SRM1-like 
 cit-r.1   102626223   transcription factor SRM1 
 sly-u.5   LeMYBI   transcription factor DIVARICATA 
 sly-u.5   101262372   transcription factor SRM1 
 sot-r.1   102599589   transcription factor DIVARICATA-like 
 sot-r.1   102582848   transcription factor DIVARICATA-like 
 nta-r.1   107769058   transcription factor DIVARICATA 
 nta-r.1   107827800   transcription factor DIVARICATA-like 
 osa-u.5   4338925   transcription factor DIVARICATA 
 osa-u.5   4324783   transcription factor DIVARICATA 
 zma-u.5   103636453   transcription factor DIVARICATA 
 zma-u.5   103630399   uncharacterized LOC103630399 
 zma-u.5   103650973   transcription factor DIVARICATA-like 
 tae-r.2   123093335   transcription factor DIVARICATA 
 tae-r.2   123062696   transcription factor DIVARICATA 
 tae-r.2   100873118   transcription factor DIVARICATA 
 hvu-r.1   123440490   transcription factor DIVARICATA-like 
 sbi-r.1   8072504   transcription factor DIVARICATA 
 sbi-r.1   8062365   transcription factor DIVARICATA 
 bdi-r.1   100835709   transcription factor DIVARICATA 

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Top 50 coexpressed genes to 1-3-1B (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 1-3-1B (gma-u.5 coexpression data)

CoexMap"102662458"


gmaLOC102662458 | Entrez gene ID : 102662458    
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 2 1 3 3 2 2 2 2 2 3 3 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein XP_006596269.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_006596269.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006596269.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
1-3-1B
gma-u.5
for
1-3-1A
mtr-u.5
for
25485559
ppo-u.5
for
7469525
ppo-u.5
for
7467960
ath-u.5
for
AT5G04760
bra-r.6
for
103850559
bra-r.6
for
103855582
vvi-u.5
for
100263868
ghi-r.1
for
107889182
ghi-r.1
for
107901859
ghi-r.1
for
107891532
bna-r.1
for
111203881
bna-r.1
for
106433113
bna-r.1
for
106358534
cit-r.1
for
102624360
cit-r.1
for
102626223
sly-u.5
for
LeMYBI
sly-u.5
for
101262372
sot-r.1
for
102599589
sot-r.1
for
102582848
nta-r.1
for
107769058
nta-r.1
for
107827800
osa-u.5
for
4338925
osa-u.5
for
4324783
zma-u.5
for
103636453
zma-u.5
for
103630399
zma-u.5
for
103650973
tae-r.2
for
123093335
tae-r.2
for
123062696
tae-r.2
for
100873118
hvu-r.1
for
123440490
sbi-r.1
for
8072504
sbi-r.1
for
8062365
bdi-r.1
for
100835709


Ortholog ID: 2838
Species gma gma mtr ppo ppo ath bra bra ghi ghi ghi bna bna cit cit sly sly sot sot nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi
Symbol 1-3-1B 1-3-1A LOC25485559 LOC7469525 LOC7467960 AT5G04760 LOC103850559 LOC103855582 LOC107889182 LOC107891532 LOC107943249 LOC111203881 LOC106358534 LOC102624360 LOC102626223 LeMYBI LOC101262372 LOC102599589 LOC102582848 LOC107827800 LOC107782691 LOC4338925 LOC4324783 LOC103636453 LOC103630399 LOC103650973 LOC123093335 LOC123150896 LOC123071514 LOC123440490 LOC8072504 LOC8062365 LOC100835709
Function* syringolide-induced protein 1-3-1B syringolide-induced protein 1-3-1A transcription factor DIVARICATA transcription factor SRM1 transcription factor SRM1 Duplicated homeodomain-like superfamily protein transcription factor DIVARICATA transcription factor DIVARICATA transcription factor SRM1 transcription factor SRM1 transcription factor DIVARICATA transcription factor DIVARICATA-like transcription factor DIVARICATA-like transcription factor SRM1-like transcription factor SRM1 transcription factor DIVARICATA transcription factor SRM1 transcription factor DIVARICATA-like transcription factor DIVARICATA-like transcription factor DIVARICATA-like transcription factor SRM1-like transcription factor DIVARICATA transcription factor DIVARICATA transcription factor DIVARICATA uncharacterized LOC103630399 transcription factor DIVARICATA-like transcription factor DIVARICATA transcription factor DIVARICATA transcription factor DIVARICATA transcription factor DIVARICATA-like transcription factor DIVARICATA transcription factor DIVARICATA transcription factor DIVARICATA
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
ppo00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00330 Arginine and proline metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00071 Fatty acid degradation 4
ghi00280 Valine, leucine and isoleucine degradation 4
ghi01212 Fatty acid metabolism 4
ghi00052 Galactose metabolism 3
ghi00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 7
ghi00380 Tryptophan metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi01200 Carbon metabolism 5
ghi04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00280 Valine, leucine and isoleucine degradation 2
cit00270 Cysteine and methionine metabolism 2
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 3
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 3
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 8
zma04075 Plant hormone signal transduction 4
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 9
zma04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 547481 548010 25485559 7469525 7467960 830354 103850559 103855582 107889182 107891532 107943249 111203881 106358534 102624360 102626223 543742 101262372 102599589 102582848 107827800 107782691 4338925 4324783 103636453 103630399 103650973 123093335 123150896 123071514 123440490 8072504 8062365 100835709
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