Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   102668428   splicing factor 1 
 gma-r.7   102668428   splicing factor 1 
 gma-u.5   100777227   splicing factor 1 
 mtr-u.5   11442475   vegetative cell wall protein gp1 
 ppo-u.5   7461374   uncharacterized LOC7461374 
 ppo-u.5   7483260   uncharacterized LOC7483260 
 ath-u.5   AT3G32940   RNA-binding KH domain-containing protein 
 vvi-u.5   100246694   vegetative cell wall protein gp1 
 sly-u.5   101266547   uncharacterized LOC101266547 
 osa-u.5   4344412   branchpoint-bridging protein 

close


Top 50 coexpressed genes to 102668428 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102668428 (gma-u.5 coexpression data)

CoexMap"102668428"


gmaLOC102668428 | Entrez gene ID : 102668428      
Species gma mtr ppo ath vvi sly osa bdi hvu bra cit bna sbi ghi sot nta cre tae zma
Paralog 3 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03040 [list] [network] Spliceosome (466 genes)
GO BP
GO:0048024 [list] [network] regulation of mRNA splicing, via spliceosome  (51 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
Protein XP_006601872.1 [sequence] [blastp]
XP_006601873.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006601872.1)
nucl 9,  cyto 1  (predict for XP_006601873.1)
Subcellular
localization
TargetP
chlo 7,  other 6  (predict for XP_006601872.1)
chlo 7,  other 6  (predict for XP_006601873.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
102668428
gma-r.7
for
102668428
gma-u.5
for
100777227
mtr-u.5
for
11442475
ppo-u.5
for
7461374
ppo-u.5
for
7483260
ath-u.5
for
AT3G32940
vvi-u.5
for
100246694
sly-u.5
for
101266547
osa-u.5
for
4344412


Ortholog ID: 10123
Species gma gma mtr ppo ppo ath bra vvi ghi ghi bna bna cit sly sot sot nta nta osa tae tae hvu sbi bdi
Symbol LOC100777227 LOC102668428 LOC11442475 LOC7483260 LOC7461374 AT3G32940 LOC103874905 LOC100246694 LOC121220152 LOC107938377 LOC125589775 LOC106410352 LOC102625244 LOC101266547 LOC102578234 LOC102603874 LOC107793768 LOC107783052 LOC4344412 LOC123169693 LOC123147715 LOC123407899 LOC8068548 LOC100834620
Function* splicing factor 1 splicing factor 1 vegetative cell wall protein gp1 uncharacterized LOC7483260 uncharacterized LOC7461374 RNA-binding KH domain-containing protein protein transport protein Sec24-like CEF vegetative cell wall protein gp1 splicing factor 1 splicing factor 1 uncharacterized LOC125589775 splicing factor 1 uncharacterized LOC102625244 uncharacterized LOC101266547 splicing factor 1 uncharacterized LOC102603874 uncharacterized LOC107793768 uncharacterized LOC107783052 branchpoint-bridging protein extensin leucine-rich repeat extensin-like protein 5 extensin splicing factor 1 atrophin-1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 10
ppo03013 Nucleocytoplasmic transport 3
ppo03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04016 MAPK signaling pathway - plant 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03013 Nucleocytoplasmic transport 4
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00230 Purine metabolism 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00230 Purine metabolism 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100777227 102668428 11442475 7483260 7461374 823058 103874905 100246694 121220152 107938377 125589775 106410352 102625244 101266547 102578234 102603874 107793768 107783052 4344412 123169693 123147715 123407899 8068548 100834620
The preparation time of this page was 0.1 [sec].