ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	103625809	protein argonaute MEL1
zma-r.6	103625809	protein argonaute MEL1
zma-u.5	100193970	uncharacterized LOC100193970
zma-u.5	100304327	argonaute1c
zma-u.5	100384259	uncharacterized LOC100384259
sbi-r.1	8066449	protein argonaute 1C
sbi-r.1	8081234	protein argonaute MEL1
osa-u.5	4343201	protein argonaute 18-like
osa-u.5	4342138	protein argonaute 1D-like
tae-r.2	123172569	protein argonaute 1B
tae-r.2	123166432	protein argonaute 1B
bdi-r.1	104583795	uncharacterized LOC104583795
bdi-r.1	100839655	protein argonaute PNH1
ath-u.5	AGO5	Argonaute family protein
ath-u.5	AGO10	Stabilizer of iron transporter SufD / Polynucleotidyl transferase
ath-u.5	AGO1	Stabilizer of iron transporter SufD / Polynucleotidyl transferase
gma-u.5	100819073	protein argonaute 10
gma-u.5	100816999	protein argonaute 10
gma-u.5	100813485	protein argonaute PNH1
sly-u.5	AGO10	protein argonaute 10
sly-u.5	101259671	protein argonaute 10
sly-u.5	AGO1B	Argonaute1B
bra-r.6	103868679	protein argonaute 1
bra-r.6	103833004	protein argonaute 1
bra-r.6	103827949	protein argonaute 10
vvi-u.5	100256320	protein argonaute 1
vvi-u.5	100258447	protein argonaute 5
ppo-u.5	7454033	protein argonaute 1
ppo-u.5	7498053	protein argonaute 10
mtr-u.5	25497351	protein argonaute 1
mtr-u.5	11409042	protein argonaute PNH1
ghi-r.1	121220847	protein argonaute 5
ghi-r.1	121224458	protein argonaute 1
ghi-r.1	107890886	protein argonaute 1
bna-r.1	106427533	protein argonaute 10
bna-r.1	106352557	protein argonaute 5-like
bna-r.1	106360539	protein argonaute 1
sot-r.1	102582607	protein argonaute 1-like
sot-r.1	102594078	protein argonaute 10-like
sot-r.1	102594657	protein argonaute 5-like
cit-r.1	112495569	protein argonaute 5-like
cit-r.1	102630678	protein argonaute 5-like
cit-r.1	102630366	protein argonaute 5
nta-r.1	107771391	protein argonaute 1
nta-r.1	107789474	protein argonaute 1B-like
nta-r.1	107790785	protein argonaute 1-like
cre-r.1	CHLRE_16g689647v5	uncharacterized protein

Top 50 coexpressed genes to 103625809 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103625809 (zma-u.5 coexpression data)

CoexMap"103625809"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003723 [list] [network] RNA binding	(1549 genes)	IEA
GO:0005515 [list] [network] protein binding	(4389 genes)	IEA

Protein

XP_020393427.1 [sequence] [blastp]
XP_035814818.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cysk 2, cysk_plas 2, cyto 1	(predict for XP_020393427.1)
nucl 5, cysk 2, cyto 2, cysk_plas 1	(predict for XP_035814818.1)

Subcellular
localization
TargetP

other 8	(predict for XP_020393427.1)
other 7	(predict for XP_035814818.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103625809	zma-r.6 for 103625809	zma-u.5 for 100193970	zma-u.5 for 100304327	zma-u.5 for 100384259	sbi-r.1 for 8066449	sbi-r.1 for 8081234	osa-u.5 for 4343201	osa-u.5 for 4342138	tae-r.2 for 123172569	tae-r.2 for 123166432	bdi-r.1 for 104583795	bdi-r.1 for 100839655	ath-u.5 for AGO5	ath-u.5 for AGO10	ath-u.5 for AGO1	gma-u.5 for 100819073	gma-u.5 for 100816999	gma-u.5 for 100813485	sly-u.5 for AGO10	sly-u.5 for 101259671	sly-u.5 for AGO1B	bra-r.6 for 103868679	bra-r.6 for 103833004	bra-r.6 for 103827949	vvi-u.5 for 100256320	vvi-u.5 for 100258447	ppo-u.5 for 7454033	ppo-u.5 for 7498053	mtr-u.5 for 25497351	mtr-u.5 for 11409042	ghi-r.1 for 121220847	ghi-r.1 for 121224458	ghi-r.1 for 107890886	bna-r.1 for 106427533	bna-r.1 for 106352557	bna-r.1 for 106360539	sot-r.1 for 102582607	sot-r.1 for 102594078	sot-r.1 for 102594657	cit-r.1 for 112495569	cit-r.1 for 102630678	cit-r.1 for 102630366	nta-r.1 for 107771391	nta-r.1 for 107789474	nta-r.1 for 107790785	cre-r.1 for CHLRE_16g689647v5

Ortholog

Ortholog ID: 261

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

AGO5

AGO10

AGO1

AGO5

AGO5

Function^*

protein argonaute MEL1

uncharacterized LOC100384259

uncharacterized LOC100384364

protein argonaute 1B

protein argonaute 13-like

protein argonaute 1A-like

protein argonaute MEL1

protein argonaute 1D

protein argonaute PNH1

protein argonaute 1A

protein argonaute MEL1

protein argonaute 1B

Argonaute family protein

Stabilizer of iron transporter SufD / Polynucleotidyl transferase

protein argonaute PNH1

argonaute 5

argonaute 1

protein argonaute 10

protein argonaute 1A-like

Argonaute 5

protein argonaute 1

protein argonaute 5

protein argonaute 1

protein argonaute 10

protein argonaute PNH1

protein argonaute 1

protein argonaute 10

protein argonaute 1-like

protein argonaute 1

protein argonaute 5

protein argonaute 10

protein argonaute 1

protein argonaute 10

protein argonaute 5-like

protein argonaute 1

protein argonaute 1-like

protein argonaute 10-like

protein argonaute 1

protein argonaute 5-like

protein argonaute MEL1-like

protein argonaute 1

protein argonaute 10

protein argonaute 1

protein argonaute PNH1-like

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03030	DNA replication	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	3
sbi03015	mRNA surveillance pathway	3
sbi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	3
sbi04120	Ubiquitin mediated proteolysis	3
sbi03015	mRNA surveillance pathway	2
sbi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	2
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03013	Nucleocytoplasmic transport	3
ath03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2
gma04141	Protein processing in endoplasmic reticulum	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2
bra04136	Autophagy - other	2
bra04518	Integrin signaling	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	4
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo04142	Lysosome	2
ppo05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3
mtr00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00760	Nicotinate and nicotinamide metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00430	Taurine and hypotaurine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

103625809

100384259

100384364

8065288

8056608

4334374

4330281

123113746

123149841

123413304

100830516

100829954

100826932

817334

834403

841262

100808457

100799033

100778754

101259671

101247032

101244672

103868679

103833004

103829691

100256320

100244311

100268067

7454033

7498053

18105620

25497351

25492353

25485122

121224458

107952160

107929142

106427533

106352557

111215636

102582607

102594078

102595869

102630678

102630160

102616587

107801972

107806342

107829827

5724406

The preparation time of this page was 0.1 [sec].


Species	zma	sbi	osa	tae	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre	hvu
Paralog	5	2	2	2	2	3	3	3	3	2	2	2	3	3	3	3	3	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103625809 (zma-u.5 coexpression data)

Top 50 enrichment test to 103625809 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**