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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5  103643142  pentatricopeptide repeat-containing protein At5g65560 
 zma-r.6  103643142  pentatricopeptide repeat-containing protein At5g65560 
 osa-u.5  4345219  pentatricopeptide repeat-containing protein At5g65560 

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Top 50 coexpressed genes to 103643142 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103643142 (zma-u.5 coexpression data)

CoexMap"103643142"


zmaLOC103643142 | Entrez gene ID : 103643142
Species zma osa sly bna ghi gma sbi nta mtr cre bra cit vvi ppo hvu bdi sot tae ath
Paralog 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_008664514.1 [sequence] [blastp]
XP_008664515.1 [sequence] [blastp]
XP_008664516.1 [sequence] [blastp]
XP_035820108.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  extr 1  (predict for XP_008664514.1)
chlo 9,  mito 1,  extr 1  (predict for XP_008664515.1)
chlo 9,  mito 1,  extr 1  (predict for XP_008664516.1)
chlo 9,  mito 1,  extr 1  (predict for XP_035820108.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_008664514.1)
chlo 4  (predict for XP_008664515.1)
chlo 4  (predict for XP_008664516.1)
chlo 4  (predict for XP_035820108.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

zma-u.5
for
103643142

.

zma-r.6
for
103643142

.

osa-u.5
for
4345219

.


Ortholog ID: 16970
Species osa zma tae tae hvu sbi bdi
Symbol LOC4345219 LOC103643142 LOC123147024 LOC123162453 LOC123407438 LOC8083535 LOC100825018
Function* pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560 pentatricopeptide repeat-containing protein At5g65560
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 2
zma04120 Ubiquitin mediated proteolysis 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4345219 103643142 123147024 123162453 123407438 8083535 100825018
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