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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103643900   pentatricopeptide repeat-containing protein 
 zma-r.6   103643900   pentatricopeptide repeat-containing protein 
 zma-m.5   103643900   pentatricopeptide repeat-containing protein 
 osa-u.5   9268979   pentatricopeptide repeat-containing protein At4g01570 
 ath-u.5   AT4G01570   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100788992   pentatricopeptide repeat-containing protein At4g01570 
 sly-u.5   101257922   pentatricopeptide repeat-containing protein At4g01570 
 vvi-u.5   100266135   pentatricopeptide repeat-containing protein At4g01570 
 ppo-u.5   18096410   pentatricopeptide repeat-containing protein At4g01570 
 mtr-u.5   11420612   pentatricopeptide repeat-containing protein At4g01570 

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Top 50 coexpressed genes to 103643900 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103643900 (zma-u.5 coexpression data)

CoexMap"103643900"


zmaLOC103643900 | Entrez gene ID : 103643900      
Species zma osa ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (13 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (14 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (803 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001317521.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for NP_001317521.1)
Subcellular
localization
TargetP
mito 3,  chlo 3  (predict for NP_001317521.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103643900

.
zma-r.6
for
103643900

.
zma-m.5
for
103643900

.
osa-u.5
for
9268979

.
ath-u.5
for
AT4G01570

.
gma-u.5
for
100788992

.
sly-u.5
for
101257922

.
vvi-u.5
for
100266135

.
ppo-u.5
for
18096410

.
mtr-u.5
for
11420612

.


Ortholog ID: 10875
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT4G01570 LOC100788992 LOC101257922 LOC9268979 LOC103643900 LOC103836811 LOC100266135 LOC18096410 LOC11420612 LOC123095881 LOC123090863 LOC123450196 LOC107953014 LOC107954407 LOC106426673 LOC106430084 LOC8063382 LOC102601172 LOC102609259 LOC104582611 LOC107816552 LOC107823019
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570-like pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570-like pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570 pentatricopeptide repeat-containing protein At4g01570-like pentatricopeptide repeat-containing protein At4g01570
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 3
osa00440 Phosphonate and phosphinate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828133 100788992 101257922 9268979 103643900 103836811 100266135 18096410 11420612 123095881 123090863 123450196 107953014 107954407 106426673 106430084 8063382 102601172 102609259 104582611 107816552 107823019
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