ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	103652033	uncharacterized LOC103652033
zma-r.6	103652033	uncharacterized LOC103652033
zma-u.5	100276806	uncharacterized LOC100276806
zma-u.5	100276760	uncharacterized LOC100276760
sbi-r.1	8067635	uncharacterized LOC8067635
osa-u.5	4349651	uncharacterized LOC4349651
osa-u.5	4351371	uncharacterized LOC4351371
tae-r.2	123086420	uncharacterized LOC123086420
tae-r.2	123091642	uncharacterized LOC123091642
tae-r.2	123096531	uncharacterized LOC123096531
hvu-r.1	123453093	uncharacterized LOC123453093
bdi-r.1	100822594	uncharacterized LOC100822594
ath-u.5	AT3G13410	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
gma-u.5	100783869	uncharacterized LOC100783869
gma-u.5	100808749	uncharacterized LOC100808749
sly-u.5	101267442	uncharacterized LOC101267442
bra-r.6	103859516	uncharacterized LOC103859516
bra-r.6	103870138	uncharacterized LOC103870138
bra-r.6	103849765	uncharacterized LOC103849765
vvi-u.5	100262157	uncharacterized LOC100262157
ppo-u.5	18097223	uncharacterized LOC18097223
ppo-u.5	7457682	uncharacterized LOC7457682
mtr-u.5	25483645	uncharacterized LOC25483645
mtr-u.5	11440653	uncharacterized LOC11440653
ghi-r.1	121204855	uncharacterized LOC121204855
ghi-r.1	107926228	uncharacterized LOC107926228
bna-r.1	106377434	uncharacterized LOC106377434
bna-r.1	BNAC03G37920D	uncharacterized BNAC03G37920D
bna-r.1	BNAC05G39960D	uncharacterized BNAC05G39960D
sot-r.1	102603557	uncharacterized LOC102603557
cit-r.1	102629623	hypothetical protein
nta-r.1	107802907	uncharacterized LOC107802907
nta-r.1	107793906	uncharacterized LOC107793906
cre-r.1	CHLRE_09g392616v5	uncharacterized protein

Top 50 coexpressed genes to 103652033 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103652033 (zma-u.5 coexpression data)

CoexMap"103652033"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_035822130.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 1, chlo 1, extr 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_035822130.1)

Subcellular
localization
TargetP

other 7

(predict for XP_035822130.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103652033	zma-r.6 for 103652033	zma-u.5 for 100276806	zma-u.5 for 100276760	sbi-r.1 for 8067635	osa-u.5 for 4349651	osa-u.5 for 4351371	tae-r.2 for 123086420	tae-r.2 for 123091642	tae-r.2 for 123096531	hvu-r.1 for 123453093	bdi-r.1 for 100822594	ath-u.5 for AT3G13410	gma-u.5 for 100783869	gma-u.5 for 100808749	sly-u.5 for 101267442	bra-r.6 for 103859516	bra-r.6 for 103870138	bra-r.6 for 103849765	vvi-u.5 for 100262157	ppo-u.5 for 18097223	ppo-u.5 for 7457682	mtr-u.5 for 25483645	mtr-u.5 for 11440653	ghi-r.1 for 121204855	ghi-r.1 for 107926228	bna-r.1 for 106377434	bna-r.1 for BNAC03G37920D	bna-r.1 for BNAC05G39960D	sot-r.1 for 102603557	cit-r.1 for 102629623	nta-r.1 for 107802907	nta-r.1 for 107793906	cre-r.1 for CHLRE_09g392616v5

Ortholog

Ortholog ID: 4720

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC103652033

uncharacterized LOC100276806

uncharacterized LOC100276760

uncharacterized LOC8067635

uncharacterized LOC4349651

uncharacterized LOC4351371

uncharacterized LOC123086420

uncharacterized LOC123103128

uncharacterized LOC123120413

uncharacterized LOC123453093

uncharacterized LOC100822594

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

uncharacterized LOC100783869

uncharacterized LOC100808749

uncharacterized LOC101267442

uncharacterized LOC103859516

uncharacterized LOC103870138

uncharacterized LOC103849765

uncharacterized LOC100262157

uncharacterized LOC18097223

uncharacterized LOC7457682

uncharacterized LOC25483645

uncharacterized LOC11440653

uncharacterized LOC121204855

uncharacterized LOC107926228

uncharacterized BNAC03G37920D

uncharacterized LOC106452270

uncharacterized LOC106377532

uncharacterized LOC102603557

hypothetical protein

uncharacterized LOC107802907

uncharacterized LOC107793906

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	14
zma04145	Phagosome	14
zma04142	Lysosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	14
zma04145	Phagosome	14
zma04142	Lysosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	13
sbi04145	Phagosome	11
sbi04142	Lysosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	8
osa04145	Phagosome	7
osa04142	Lysosome	3
osa01200	Carbon metabolism	3
osa04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	9
osa04145	Phagosome	8
osa04142	Lysosome	3
osa01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	6
tae04142	Lysosome	6
tae04145	Phagosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	5
tae00190	Oxidative phosphorylation	4
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	7
tae00190	Oxidative phosphorylation	6
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	5
hvu04145	Phagosome	4
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	9
bdi04145	Phagosome	9
bdi04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	12
ath04145	Phagosome	12
ath04142	Lysosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	6
gma04145	Phagosome	6
gma04144	Endocytosis	4
gma04142	Lysosome	3
gma00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	8
gma04145	Phagosome	8
gma04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	7
sly04145	Phagosome	6
sly04142	Lysosome	5
sly00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	10
bra04145	Phagosome	10
bra04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	8
bra04145	Phagosome	8
bra04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	10
bra04145	Phagosome	10
bra04142	Lysosome	6
bra00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	3
vvi00190	Oxidative phosphorylation	2
vvi04142	Lysosome	2
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	7
ppo04145	Phagosome	6
ppo04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	9
mtr04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	8
mtr04145	Phagosome	6
mtr04142	Lysosome	3
mtr00330	Arginine and proline metabolism	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	3
bna00600	Sphingolipid metabolism	3
bna00062	Fatty acid elongation	2
bna01212	Fatty acid metabolism	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	3
bna04145	Phagosome	3
bna04148	Efferocytosis	3
bna00600	Sphingolipid metabolism	3
bna00062	Fatty acid elongation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	3
bna04145	Phagosome	3
bna04148	Efferocytosis	3
bna00600	Sphingolipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	8
sot04145	Phagosome	7
sot04142	Lysosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	4
nta04145	Phagosome	4
nta04142	Lysosome	2
nta00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	7
nta04145	Phagosome	7
nta04142	Lysosome	2
nta00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	5
cre04145	Phagosome	5
cre00190	Oxidative phosphorylation	3
cre04148	Efferocytosis	2
cre04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

103652033

100276806

100276760

8067635

4349651

4351371

123086420

123103128

123120413

123453093

100822594

820541

100783869

100808749

101267442

103859516

103870138

103849765

100262157

18097223

7457682

25483645

11440653

121204855

107926228

106389118

106452270

106377532

102603557

102629623

107802907

107793906

5720255

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Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	1	2	3	1	1	1	2	1	3	1	2	2	2	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103652033 (zma-u.5 coexpression data)

Top 50 enrichment test to 103652033 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**