ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	103653627	T-complex protein 11
zma-r.6	103653627	T-complex protein 11
zma-m.5	103653627	T-complex protein 11
zma-u.5	103646427	uncharacterized LOC103646427
zma-u.5	103648533	uncharacterized LOC103648533
zma-u.5	109939724	uncharacterized LOC109939724
sbi-r.1	8075838	uncharacterized LOC8075838
sbi-r.1	8064272	uncharacterized LOC8064272
osa-u.5	4335923	uncharacterized LOC4335923
osa-u.5	4329667	uncharacterized LOC4329667
osa-u.5	4335922	uncharacterized LOC4335922
tae-r.2	123189280	uncharacterized LOC123189280
tae-r.2	123144214	uncharacterized LOC123144214
tae-r.2	123045524	uncharacterized LOC123045524
hvu-r.1	123426783	uncharacterized LOC123426783
hvu-r.1	123426782	uncharacterized LOC123426782
hvu-r.1	123406337	uncharacterized LOC123406337
bdi-r.1	100841358	uncharacterized LOC100841358
bdi-r.1	100822713	uncharacterized LOC100822713
ath-u.5	AT4G09150	T-complex protein 11
ath-u.5	AT1G22930	T-complex protein 11
gma-u.5	100811199	uncharacterized LOC100811199
gma-u.5	100810394	uncharacterized LOC100810394
sly-u.5	101250254	uncharacterized LOC101250254
sly-u.5	101259054	uncharacterized LOC101259054
bra-r.6	103838833	uncharacterized LOC103838833
bra-r.6	103840814	uncharacterized LOC103840814
vvi-u.5	100252816	uncharacterized LOC100252816
vvi-u.5	100253141	uncharacterized LOC100253141
ppo-u.5	18098263	uncharacterized LOC18098263
ppo-u.5	18104388	uncharacterized LOC18104388
mtr-u.5	11423568	uncharacterized LOC11423568
ghi-r.1	107927927	uncharacterized LOC107927927
ghi-r.1	107894238	uncharacterized LOC107894238
ghi-r.1	107919836	uncharacterized LOC107919836
bna-r.1	111208683	uncharacterized LOC111208683
bna-r.1	106360972	uncharacterized LOC106360972
bna-r.1	106347522	uncharacterized LOC106347522
sot-r.1	102598750	uncharacterized LOC102598750
sot-r.1	102603063	uncharacterized LOC102603063
cit-r.1	102611268	uncharacterized LOC102611268
nta-r.1	107809509	uncharacterized LOC107809509
nta-r.1	107801999	uncharacterized LOC107801999
nta-r.1	107800751	uncharacterized LOC107800751
cre-r.1	CHLRE_14g631250v5	uncharacterized protein

Top 50 coexpressed genes to 103653627 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103653627 (zma-u.5 coexpression data)

CoexMap"103653627"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0007165 [list] [network] signal transduction

(710 genes)

IEA

GO CC

GO MF

Protein

XP_008678693.1 [sequence] [blastp]
XP_035823213.1 [sequence] [blastp]
XP_035823214.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 2, plas 1, cysk_nucl 1, E.R._plas 1	(predict for XP_008678693.1)
chlo 4, vacu 4, nucl 1, plas 1, golg 1, nucl_plas 1, golg_plas 1	(predict for XP_035823213.1)
nucl 4, plas 2, cyto 2, E.R._plas 2, E.R. 1, cyto_pero 1	(predict for XP_035823214.1)

Subcellular
localization
TargetP

chlo 6, other 6	(predict for XP_008678693.1)
scret 5	(predict for XP_035823213.1)
chlo 6, other 6	(predict for XP_035823214.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103653627	zma-r.6 for 103653627	zma-m.5 for 103653627	zma-u.5 for 103646427	zma-u.5 for 103648533	zma-u.5 for 109939724	sbi-r.1 for 8075838	sbi-r.1 for 8064272	osa-u.5 for 4335923	osa-u.5 for 4329667	osa-u.5 for 4335922	tae-r.2 for 123189280	tae-r.2 for 123144214	tae-r.2 for 123045524	hvu-r.1 for 123426783	hvu-r.1 for 123426782	hvu-r.1 for 123406337	bdi-r.1 for 100841358	bdi-r.1 for 100822713	ath-u.5 for AT4G09150	ath-u.5 for AT1G22930	gma-u.5 for 100811199	gma-u.5 for 100810394	sly-u.5 for 101250254	sly-u.5 for 101259054	bra-r.6 for 103838833	bra-r.6 for 103840814	vvi-u.5 for 100252816	vvi-u.5 for 100253141	ppo-u.5 for 18098263	ppo-u.5 for 18104388	mtr-u.5 for 11423568	ghi-r.1 for 107927927	ghi-r.1 for 107894238	ghi-r.1 for 107919836	bna-r.1 for 111208683	bna-r.1 for 106360972	bna-r.1 for 106347522	sot-r.1 for 102598750	sot-r.1 for 102603063	cit-r.1 for 102611268	nta-r.1 for 107809509	nta-r.1 for 107801999	nta-r.1 for 107800751	cre-r.1 for CHLRE_14g631250v5

Ortholog

Ortholog ID: 3245

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC103646427

uncharacterized LOC103648533

uncharacterized LOC109939724

uncharacterized LOC8075838

uncharacterized LOC8064272

uncharacterized LOC4335923

uncharacterized LOC4329667

uncharacterized LOC4335922

uncharacterized LOC123189280

uncharacterized LOC123144214

uncharacterized LOC123189276

uncharacterized LOC123426783

uncharacterized LOC123426782

uncharacterized LOC123406337

uncharacterized LOC100841358

uncharacterized LOC100822713

T-complex protein 11

uncharacterized LOC100811199

uncharacterized LOC100810394

uncharacterized LOC101250254

uncharacterized LOC101259054

uncharacterized LOC103838833

uncharacterized LOC103840814

uncharacterized LOC100252816

uncharacterized LOC100253141

uncharacterized LOC18098263

uncharacterized LOC18104388

uncharacterized LOC11423568

uncharacterized LOC107927927

uncharacterized LOC107894238

uncharacterized LOC107919836

uncharacterized LOC106360972

uncharacterized LOC106347522

uncharacterized LOC106400621

uncharacterized LOC102598750

uncharacterized LOC102603063

uncharacterized LOC102611268

uncharacterized LOC107801999

uncharacterized LOC107800751

uncharacterized LOC107762043

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	3
zma00030	Pentose phosphate pathway	3
zma00051	Fructose and mannose metabolism	3
zma00052	Galactose metabolism	3
zma01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	3
zma00010	Glycolysis / Gluconeogenesis	3
zma00030	Pentose phosphate pathway	3
zma00051	Fructose and mannose metabolism	3
zma00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	3
zma00010	Glycolysis / Gluconeogenesis	3
zma00030	Pentose phosphate pathway	3
zma00051	Fructose and mannose metabolism	3
zma00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	5
osa01200	Carbon metabolism	5
osa00710	Carbon fixation by Calvin cycle	4
osa00030	Pentose phosphate pathway	3
osa00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00710	Carbon fixation by Calvin cycle	2
osa01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	3
tae00562	Inositol phosphate metabolism	2
tae04070	Phosphatidylinositol signaling system	2
tae04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00010	Glycolysis / Gluconeogenesis	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00270	Cysteine and methionine metabolism	2
gma00330	Arginine and proline metabolism	2
gma00480	Glutathione metabolism	2
gma03015	mRNA surveillance pathway	2
gma00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	5
vvi03040	Spliceosome	2
vvi04144	Endocytosis	2
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3
vvi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	4
ghi01230	Biosynthesis of amino acids	4
ghi04712	Circadian rhythm - plant	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	6
bna00565	Ether lipid metabolism	2
bna04144	Endocytosis	2
bna00561	Glycerolipid metabolism	2
bna04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3
sot04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00640	Propanoate metabolism	2
cit01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00052	Galactose metabolism	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00052	Galactose metabolism	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04136	Autophagy - other	2

Expression

Expression pattern

Entrez Gene ID^*

103646427

103648533

109939724

8075838

8064272

4335923

4329667

4335922

123189280

123144214

123189276

123426783

123426782

123406337

100841358

100822713

826496

838900

100811199

100810394

101250254

101259054

103838833

103840814

100252816

100253141

18098263

18104388

11423568

107927927

107894238

107919836

106360972

106347522

106400621

102598750

102603063

102611268

107801999

107800751

107762043

66056335

The preparation time of this page was 0.1 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	6	2	3	3	3	2	2	2	2	2	2	2	1	3	3	2	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103653627 (zma-u.5 coexpression data)

Top 50 enrichment test to 103653627 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**