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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103654915   mediator of RNA polymerase II transcription subunit 17-like 
 zma-r.6   103654915   mediator of RNA polymerase II transcription subunit 17-like 
 zma-u.5   100279335   Mediator of RNA polymerase II transcription subunit 17 
 sbi-r.1   8072356   mediator of RNA polymerase II transcription subunit 17 
 osa-u.5   4352909   mediator of RNA polymerase II transcription subunit 17 
 tae-r.2   123166579   mediator of RNA polymerase II transcription subunit 17 
 tae-r.2   123164880   mediator of RNA polymerase II transcription subunit 17 
 tae-r.2   123156172   mediator of RNA polymerase II transcription subunit 17 
 hvu-r.1   123407610   mediator of RNA polymerase II transcription subunit 17-like 
 hvu-r.1   123411255   mediator of RNA polymerase II transcription subunit 17-like 
 bdi-r.1   100822959   mediator of RNA polymerase II transcription subunit 17 
 ath-u.5   AT5G20170   RNA polymerase II transcription mediator 
 gma-u.5   100810597   mediator of RNA polymerase II transcription subunit 17 
 gma-u.5   100778422   mediator of RNA polymerase II transcription subunit 17 
 sly-u.5   101264702   mediator of RNA polymerase II transcription subunit 17 
 bra-r.6   103856430   mediator of RNA polymerase II transcription subunit 17 
 vvi-u.5   100266409   mediator of RNA polymerase II transcription subunit 17 
 ppo-u.5   18105738   mediator of RNA polymerase II transcription subunit 17 
 mtr-u.5   11442856   mediator of RNA polymerase II transcription subunit 17 
 ghi-r.1   107907267   mediator of RNA polymerase II transcription subunit 17 
 ghi-r.1   107907348   mediator of RNA polymerase II transcription subunit 17 
 ghi-r.1   107939425   mediator of RNA polymerase II transcription subunit 17 
 bna-r.1   106386704   mediator of RNA polymerase II transcription subunit 17 
 bna-r.1   106434628   mediator of RNA polymerase II transcription subunit 17 
 sot-r.1   102596306   mediator of RNA polymerase II transcription subunit 17 
 cit-r.1   102622560   mediator of RNA polymerase II transcription subunit 17 
 nta-r.1   107789140   mediator of RNA polymerase II transcription subunit 17 
 nta-r.1   107829186   mediator of RNA polymerase II transcription subunit 17 

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Top 50 coexpressed genes to 103654915 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103654915 (zma-u.5 coexpression data)

CoexMap"103654915"


zmaLOC103654915 | Entrez gene ID : 103654915      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 2 1 1 2 1 1 1 1 1 3 2 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (427 genes)  IEA  
GO CC
GO:0070847 [list] [network] core mediator complex  (9 genes)  IEA  
GO:0016592 [list] [network] mediator complex  (45 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (148 genes)  IEA  
Protein NP_001288373.1 [sequence] [blastp]
XP_008679945.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for NP_001288373.1)
nucl 9,  cyto 1,  mito 1  (predict for XP_008679945.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001288373.1)
other 8  (predict for XP_008679945.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103654915
zma-r.6
for
103654915
zma-u.5
for
100279335
sbi-r.1
for
8072356
osa-u.5
for
4352909
tae-r.2
for
123166579
tae-r.2
for
123164880
tae-r.2
for
123156172
hvu-r.1
for
123407610
hvu-r.1
for
123411255
bdi-r.1
for
100822959
ath-u.5
for
AT5G20170
gma-u.5
for
100810597
gma-u.5
for
100778422
sly-u.5
for
101264702
bra-r.6
for
103856430
vvi-u.5
for
100266409
ppo-u.5
for
18105738
mtr-u.5
for
11442856
ghi-r.1
for
107907267
ghi-r.1
for
107907348
ghi-r.1
for
107939425
bna-r.1
for
106386704
bna-r.1
for
106434628
sot-r.1
for
102596306
cit-r.1
for
102622560
nta-r.1
for
107789140
nta-r.1
for
107829186


Ortholog ID: 7342
Species zma zma sbi osa tae tae tae hvu hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi ghi bna bna sot cit nta nta
Symbol LOC103654915 LOC100279335 LOC8072356 LOC4352909 LOC123166579 LOC123149427 LOC123087905 LOC123407610 LOC123411255 LOC100822959 AT5G20170 LOC100810597 LOC100778422 LOC101264702 LOC103856430 LOC100266409 LOC18105738 LOC11442856 LOC107907348 LOC107939425 LOC107953707 LOC106386704 LOC106434628 LOC102596306 LOC102622560 LOC107789140 LOC107829186
Function* mediator of RNA polymerase II transcription subunit 17-like Mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17-like mediator of RNA polymerase II transcription subunit 17-like mediator of RNA polymerase II transcription subunit 17 RNA polymerase II transcription mediator mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17 mediator of RNA polymerase II transcription subunit 17
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
sbi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
osa03082 ATP-dependent chromatin remodeling 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot03040 Spliceosome 2
sot03250 Viral life cycle - HIV-1 2
sot03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103654915 100279335 8072356 4352909 123166579 123149427 123087905 123407610 123411255 100822959 832140 100810597 100778422 101264702 103856430 100266409 18105738 11442856 107907348 107939425 107953707 106386704 106434628 102596306 102622560 107789140 107829186
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