ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103828233	NADPH-dependent aldehyde reductase-like protein, chloroplastic
ath-u.5	AT3G03980	NAD(P)-binding Rossmann-fold superfamily protein
ath-u.5	AT4G13180	NAD(P)-binding Rossmann-fold superfamily protein
ath-u.5	AT5G18210	NAD(P)-binding Rossmann-fold superfamily protein
gma-u.5	100809416	NADPH-dependent aldehyde reductase-like protein, chloroplastic
vvi-u.5	100241750	NADPH-dependent aldehyde reductase-like protein, chloroplastic
ppo-u.5	7453591	NADPH-dependent aldehyde reductase-like protein, chloroplastic
ppo-u.5	7489673	NADPH-dependent aldehyde reductase-like protein, chloroplastic
ppo-u.5	7489674	NADPH-dependent aldehyde reductase-like protein, chloroplastic
mtr-u.5	25484124	NADPH-dependent aldehyde reductase-like protein, chloroplastic
mtr-u.5	25499094	NADPH-dependent aldehyde reductase-like protein, chloroplastic
mtr-u.5	25499093	NADPH-dependent aldehyde reductase-like protein, chloroplastic
sly-u.5	101249180	NADPH-dependent aldehyde reductase-like protein, chloroplastic
sly-u.5	101249464	NADPH-dependent aldehyde reductase-like protein, chloroplastic
sly-u.5	109118694	NADPH-dependent aldehyde reductase-like protein, chloroplastic
osa-u.5	4348791	NADPH-dependent aldehyde reductase-like protein, chloroplastic
osa-u.5	4343598	NADPH-dependent aldehyde reductase-like protein, chloroplastic
osa-u.5	4342507	NADPH-dependent aldehyde reductase-like protein, chloroplastic
zma-u.5	103631989	short-chain type dehydrogenase/reductase-like
zma-u.5	100285462	versicolorin reductase
zma-u.5	100285342	uncharacterized LOC100285342

Top 50 coexpressed genes to 103828233 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103828233 (bra-r.6 coexpression data)

CoexMap"103828233"

[Cytoscape]

Annotation

functional annotation

KEGG

brp00061 [list] [network] Fatty acid biosynthesis (66 genes)

brp00780 [list] [network] Biotin metabolism (28 genes)

brp01212 [list] [network] Fatty acid metabolism (108 genes)

brp01240 [list] [network] Biosynthesis of cofactors (357 genes)

GO BP

GO CC

GO MF

GO:0016491 [list] [network] oxidoreductase activity

(1765 genes)

IEA

Protein

XP_033147355.1 [sequence] [blastp]
XP_033147357.1 [sequence] [blastp]
XP_033147364.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, chlo_mito 5, mito 1	(predict for XP_033147355.1)
chlo 8, chlo_mito 5, mito 1	(predict for XP_033147357.1)
chlo 8, chlo_mito 5, mito 1	(predict for XP_033147364.1)

Subcellular
localization
TargetP

mito 3	(predict for XP_033147355.1)
mito 3	(predict for XP_033147357.1)
mito 3	(predict for XP_033147364.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103828233	ath-u.5 for AT3G03980	ath-u.5 for AT4G13180	ath-u.5 for AT5G18210	gma-u.5 for 100809416	vvi-u.5 for 100241750	ppo-u.5 for 7453591	ppo-u.5 for 7489673	ppo-u.5 for 7489674	mtr-u.5 for 25484124	mtr-u.5 for 25499094	mtr-u.5 for 25499093	sly-u.5 for 101249180	sly-u.5 for 101249464	sly-u.5 for 109118694	osa-u.5 for 4348791	osa-u.5 for 4343598	osa-u.5 for 4342507	zma-u.5 for 103631989	zma-u.5 for 100285462	zma-u.5 for 100285342

Ortholog

Ortholog ID: 2079

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

NADPH-dependent aldehyde reductase-like protein, chloroplastic

NAD(P)-binding Rossmann-fold superfamily protein

NADPH-dependent aldehyde reductase-like protein, chloroplastic

short-chain type dehydrogenase/reductase-like

NADPH-dependent aldehyde reductase-like protein, chloroplastic

versicolorin reductase

short-chain type dehydrogenase/reductase-like

NADPH-dependent aldehyde reductase-like protein, chloroplastic

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	3
bra00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
bra04146	Peroxisome	2
bra00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00061	Fatty acid biosynthesis	3
bna00780	Biotin metabolism	3
bna01212	Fatty acid metabolism	3
bna01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00280	Valine, leucine and isoleucine degradation	4
ath01212	Fatty acid metabolism	3
ath04146	Peroxisome	2
ath00061	Fatty acid biosynthesis	2
ath00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	3
ghi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00630	Glyoxylate and dicarboxylate metabolism	5
ghi00071	Fatty acid degradation	4
ghi01200	Carbon metabolism	4
ghi01230	Biosynthesis of amino acids	3
ghi00061	Fatty acid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	7
gma03040	Spliceosome	3
gma04144	Endocytosis	3
gma00270	Cysteine and methionine metabolism	2
gma00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03083	Polycomb repressive complex	3
ppo04120	Ubiquitin mediated proteolysis	3
ppo04141	Protein processing in endoplasmic reticulum	3
ppo04146	Peroxisome	2
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00592	alpha-Linolenic acid metabolism	2
mtr01200	Carbon metabolism	2
mtr01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	2
mtr00061	Fatty acid biosynthesis	2
mtr00780	Biotin metabolism	2
mtr01212	Fatty acid metabolism	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00061	Fatty acid biosynthesis	2
sly00780	Biotin metabolism	2
sly01212	Fatty acid metabolism	2
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	4
sly01200	Carbon metabolism	4
sly01230	Biosynthesis of amino acids	4
sly00710	Carbon fixation by Calvin cycle	3
sly00061	Fatty acid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	3
sot00010	Glycolysis / Gluconeogenesis	2
sot00020	Citrate cycle (TCA cycle)	2
sot00620	Pyruvate metabolism	2
sot00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00061	Fatty acid biosynthesis	2
sot00780	Biotin metabolism	2
sot01212	Fatty acid metabolism	2
sot01240	Biosynthesis of cofactors	2
sot02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00999	Biosynthesis of various plant secondary metabolites	4
nta00061	Fatty acid biosynthesis	3
nta00780	Biotin metabolism	3
nta01212	Fatty acid metabolism	3
nta01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00999	Biosynthesis of various plant secondary metabolites	4
nta00061	Fatty acid biosynthesis	3
nta00780	Biotin metabolism	3
nta01212	Fatty acid metabolism	3
nta01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	3
osa00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	3
osa00906	Carotenoid biosynthesis	2
osa00900	Terpenoid backbone biosynthesis	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	6
zma00061	Fatty acid biosynthesis	2
zma00780	Biotin metabolism	2
zma01212	Fatty acid metabolism	2
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00592	alpha-Linolenic acid metabolism	3
tae00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00061	Fatty acid biosynthesis	2
bdi00780	Biotin metabolism	2
bdi01212	Fatty acid metabolism	2
bdi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00480	Glutathione metabolism	3
bdi00592	alpha-Linolenic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

103828233

103863644

106447907

826932

819553

107888483

107888492

102615814

100809416

100241750

7489673

7489674

25484124

25499093

101249180

101249464

102580300

102591367

107781387

107790362

4343598

4340334

100285462

103631989

123105793

123410249

123449484

8081173

100822296

100832802

The preparation time of this page was 0.1 [sec].


Species	bra	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	3	1	1	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103828233 (bra-r.6 coexpression data)

Top 50 enrichment test to 103828233 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**