ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103829693	uncharacterized LOC103829693
bra-r.6	103870459	uncharacterized LOC103870459
bra-r.6	103847289	histone-lysine N-methyltransferase, H3 lysine-79 specific
bra-r.6	103847499	uncharacterized LOC103847499
bna-r.1	106352556	uncharacterized LOC106352556
bna-r.1	106377149	uncharacterized LOC106377149
bna-r.1	106381194	uncharacterized LOC106381194
ath-u.5	AT2G27950	Ring/U-Box superfamily protein
ath-u.5	AT5G04460	RING/U-box superfamily protein
ghi-r.1	107891591	uncharacterized LOC107891591
ghi-r.1	107906647	uncharacterized LOC107906647
ghi-r.1	107912978	uncharacterized LOC107912978
cit-r.1	102623678	uncharacterized LOC102623678
cit-r.1	102620844	uncharacterized LOC102620844
gma-u.5	100803851	uncharacterized LOC100803851
gma-u.5	100804184	uncharacterized LOC100804184
gma-u.5	100804887	uncharacterized LOC100804887
vvi-u.5	100243144	uncharacterized LOC100243144
vvi-u.5	100241098	uncharacterized LOC100241098
ppo-u.5	7463470	uncharacterized LOC7463470
ppo-u.5	7496464	uncharacterized LOC7496464
ppo-u.5	18098262	uncharacterized LOC18098262
mtr-u.5	25484842	uncharacterized LOC25484842
mtr-u.5	25487467	RING finger protein PFF0165c
mtr-u.5	25492361	uncharacterized LOC25492361
sly-u.5	101260292	uncharacterized LOC101260292
sot-r.1	102600663	uncharacterized LOC102600663
sot-r.1	102590154	uncharacterized LOC102590154
nta-r.1	107791577	uncharacterized LOC107791577
nta-r.1	107793403	uncharacterized LOC107793403
nta-r.1	107819276	uncharacterized LOC107819276
osa-u.5	4331196	uncharacterized LOC4331196
zma-u.5	103654099	RING/U-box superfamily protein
zma-u.5	100278771	uncharacterized LOC100278771
tae-r.2	123095566	uncharacterized LOC123095566
tae-r.2	123146256	uncharacterized LOC123146256
tae-r.2	123139982	uncharacterized LOC123139982
hvu-r.1	123402156	uncharacterized LOC123402156
hvu-r.1	123446805	uncharacterized LOC123446805
sbi-r.1	110432550	uncharacterized LOC110432550
sbi-r.1	8059709	uncharacterized LOC8059709
bdi-r.1	100844988	uncharacterized LOC100844988

Top 50 coexpressed genes to 103829693 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103829693 (bra-r.6 coexpression data)

CoexMap"103829693"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_009103630.1 [sequence] [blastp]
XP_009103631.1 [sequence] [blastp]
XP_009103632.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, chlo 2, extr 2, vacu 1, E.R. 1, cyto_nucl 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1	(predict for XP_009103630.1)
nucl 3, chlo 2, extr 2, vacu 1, E.R. 1, cyto_nucl 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1	(predict for XP_009103631.1)
nucl 3, chlo 2, extr 2, vacu 1, E.R. 1, cyto_nucl 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1	(predict for XP_009103632.1)

Subcellular
localization
TargetP

chlo 7	(predict for XP_009103630.1)
chlo 7	(predict for XP_009103631.1)
chlo 7	(predict for XP_009103632.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103829693	bra-r.6 for 103870459	bra-r.6 for 103847289	bra-r.6 for 103847499	bna-r.1 for 106352556	bna-r.1 for 106377149	bna-r.1 for 106381194	ath-u.5 for AT2G27950	ath-u.5 for AT5G04460	ghi-r.1 for 107891591	ghi-r.1 for 107906647	ghi-r.1 for 107912978	cit-r.1 for 102623678	cit-r.1 for 102620844	gma-u.5 for 100803851	gma-u.5 for 100804184	gma-u.5 for 100804887	vvi-u.5 for 100243144	vvi-u.5 for 100241098	ppo-u.5 for 7463470	ppo-u.5 for 7496464	ppo-u.5 for 18098262	mtr-u.5 for 25484842	mtr-u.5 for 25487467	mtr-u.5 for 25492361	sly-u.5 for 101260292	sot-r.1 for 102600663	sot-r.1 for 102590154	nta-r.1 for 107791577	nta-r.1 for 107793403	nta-r.1 for 107819276	osa-u.5 for 4331196	zma-u.5 for 103654099	zma-u.5 for 100278771	tae-r.2 for 123095566	tae-r.2 for 123146256	tae-r.2 for 123139982	hvu-r.1 for 123402156	hvu-r.1 for 123446805	sbi-r.1 for 110432550	sbi-r.1 for 8059709	bdi-r.1 for 100844988

Ortholog

Ortholog ID: 2390

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC103829693

histone-lysine N-methyltransferase, H3 lysine-79 specific

uncharacterized LOC103847499

uncharacterized LOC106381194

uncharacterized LOC106433124

histone-lysine N-methyltransferase, H3 lysine-79 specific

Ring/U-Box superfamily protein

RING/U-box superfamily protein

uncharacterized LOC107912978

uncharacterized LOC107915780

uncharacterized LOC107930648

uncharacterized LOC102623678

uncharacterized LOC102620844

uncharacterized LOC100803851

uncharacterized LOC100804887

uncharacterized LOC100784174

uncharacterized LOC100243144

uncharacterized LOC100241098

uncharacterized LOC7463470

uncharacterized LOC7496464

uncharacterized LOC18098262

uncharacterized LOC25484842

RING finger protein PFF0165c

uncharacterized LOC25492361

uncharacterized LOC101260292

uncharacterized LOC102600663

uncharacterized LOC102590154

uncharacterized LOC107791577

uncharacterized LOC107819276

uncharacterized LOC107803453

uncharacterized LOC4331196

RING/U-box superfamily protein

uncharacterized LOC100278771

uncharacterized LOC123095566

uncharacterized LOC123146256

uncharacterized LOC123139982

uncharacterized LOC123402156

uncharacterized LOC123446805

uncharacterized LOC110432550

uncharacterized LOC8059709

uncharacterized LOC100844988

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2
bra02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	4
cit04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	7
gma04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	5
gma04142	Lysosome	2
gma04144	Endocytosis	2
gma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	3
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta04626	Plant-pathogen interaction	2
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	3
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03083	Polycomb repressive complex	2
bdi03250	Viral life cycle - HIV-1	2

Expression

Expression pattern

Entrez Gene ID^*

103829693

103847289

103847499

106381194

106433124

106372513

817339

830324

107912978

107915780

107930648

102623678

102620844

100803851

100804887

100784174

100243144

100241098

7463470

7496464

18098262

25484842

25487467

25492361

101260292

102600663

102590154

107791577

107819276

107803453

4331196

103654099

100278771

123095566

123146256

123139982

123402156

123446805

110432550

8059709

100844988

The preparation time of this page was 0.2 [sec].


Species	bra	bna	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	2	3	2	3	3	1	2	3	1	2	3	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103829693 (bra-r.6 coexpression data)

Top 50 enrichment test to 103829693 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**