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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103829953   uracil phosphoribosyltransferase, chloroplastic 
 bra-r.6   103841311   uracil phosphoribosyltransferase, chloroplastic 
 bna-r.1   106411964   uracil phosphoribosyltransferase, chloroplastic 
 bna-r.1   106407174   uracil phosphoribosyltransferase, chloroplastic 
 bna-r.1   106382781   uracil phosphoribosyltransferase, chloroplastic 
 ath-u.5   UPP   uracil phosphoribosyltransferase 
 ghi-r.1   107891077   uracil phosphoribosyltransferase 
 ghi-r.1   107889637   uracil phosphoribosyltransferase 
 cit-r.1   102620885   uracil phosphoribosyltransferase 
 gma-u.5   100797953   putative uracil phosphoribosyltransferase 
 gma-u.5   100797537   uracil phosphoribosyltransferase-like 
 vvi-u.5   100261300   uracil phosphoribosyltransferase 
 ppo-u.5   18099995   uracil phosphoribosyltransferase 
 mtr-u.5   25491555   uracil phosphoribosyltransferase 
 sly-u.5   101256028   uracil phosphoribosyltransferase 
 sot-r.1   102592632   uracil phosphoribosyltransferase 
 nta-r.1   107787906   uracil phosphoribosyltransferase 
 nta-r.1   107827713   uracil phosphoribosyltransferase-like 
 osa-u.5   4338981   uracil phosphoribosyltransferase 
 zma-u.5   100286008   uncharacterized LOC100286008 
 zma-u.5   100284489   uncharacterized LOC100284489 
 tae-r.2   123135740   uracil phosphoribosyltransferase 
 tae-r.2   123058690   uracil phosphoribosyltransferase 
 tae-r.2   123182225   uracil phosphoribosyltransferase 
 hvu-r.1   123415151   uracil phosphoribosyltransferase 
 sbi-r.1   8061756   uracil phosphoribosyltransferase 
 sbi-r.1   110436842   uracil phosphoribosyltransferase-like 
 bdi-r.1   100821601   uracil phosphoribosyltransferase 
 cre-r.1   CHLRE_11g467778v5   uncharacterized protein 

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Top 50 coexpressed genes to 103829953 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103829953 (bra-r.6 coexpression data)

CoexMap"103829953"


braLOC103829953 | Entrez gene ID : 103829953    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 2 1 2 1 1 1 1 1 2 1 2 3 1 2 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00240 [list] [network] Pyrimidine metabolism (98 genes)
brp01232 [list] [network] Nucleotide metabolism (119 genes)
GO BP
GO:0006223 [list] [network] uracil salvage  (2 genes)  IEA  
GO CC
GO MF
GO:0004845 [list] [network] uracil phosphoribosyltransferase activity  (2 genes)  IEA  
Protein XP_009103884.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 2,  nucl 1,  vacu 1  (predict for XP_009103884.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_009103884.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103829953
bra-r.6
for
103841311
bna-r.1
for
106411964
bna-r.1
for
106407174
bna-r.1
for
106382781
ath-u.5
for
UPP
ghi-r.1
for
107891077
ghi-r.1
for
107889637
cit-r.1
for
102620885
gma-u.5
for
100797953
gma-u.5
for
100797537
vvi-u.5
for
100261300
ppo-u.5
for
18099995
mtr-u.5
for
25491555
sly-u.5
for
101256028
sot-r.1
for
102592632
nta-r.1
for
107787906
nta-r.1
for
107827713
osa-u.5
for
4338981
zma-u.5
for
100286008
zma-u.5
for
100284489
tae-r.2
for
123135740
tae-r.2
for
123058690
tae-r.2
for
123182225
hvu-r.1
for
123415151
sbi-r.1
for
8061756
sbi-r.1
for
110436842
bdi-r.1
for
100821601
cre-r.1
for
CHLRE_11g467778v5


Ortholog ID: 7249
Species bra bra bna bna bna ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC103829953 LOC103841311 LOC106411964 LOC106407174 LOC106382781 UPP LOC107891077 LOC107889637 LOC102620885 LOC100797953 LOC100797537 LOC100261300 LOC18099995 LOC25491555 LOC101256028 LOC102592632 LOC107787906 LOC107827713 LOC4338981 LOC100286008 LOC100284489 LOC123135740 LOC123058690 LOC123182225 LOC123415151 LOC8061756 LOC110436842 LOC100821601 CHLRE_11g467778v5
Function* uracil phosphoribosyltransferase, chloroplastic uracil phosphoribosyltransferase, chloroplastic uracil phosphoribosyltransferase, chloroplastic uracil phosphoribosyltransferase, chloroplastic uracil phosphoribosyltransferase, chloroplastic uracil phosphoribosyltransferase uracil phosphoribosyltransferase uracil phosphoribosyltransferase uracil phosphoribosyltransferase putative uracil phosphoribosyltransferase uracil phosphoribosyltransferase-like uracil phosphoribosyltransferase uracil phosphoribosyltransferase uracil phosphoribosyltransferase uracil phosphoribosyltransferase uracil phosphoribosyltransferase uracil phosphoribosyltransferase uracil phosphoribosyltransferase-like uracil phosphoribosyltransferase uncharacterized LOC100286008 uncharacterized LOC100284489 uracil phosphoribosyltransferase uracil phosphoribosyltransferase uracil phosphoribosyltransferase uracil phosphoribosyltransferase uracil phosphoribosyltransferase uracil phosphoribosyltransferase-like uracil phosphoribosyltransferase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 5
bna01232 Nucleotide metabolism 5
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 8
bna01232 Nucleotide metabolism 8
bna00230 Purine metabolism 4
bna01240 Biosynthesis of cofactors 4
bna04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 8
bna01232 Nucleotide metabolism 8
bna00230 Purine metabolism 4
bna01240 Biosynthesis of cofactors 4
bna04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath01240 Biosynthesis of cofactors 2
ath00300 Lysine biosynthesis 2
ath01230 Biosynthesis of amino acids 2
ath00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
ghi01230 Biosynthesis of amino acids 3
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
ghi01230 Biosynthesis of amino acids 3
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00030 Pentose phosphate pathway 2
gma00230 Purine metabolism 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 4
ppo01240 Biosynthesis of cofactors 2
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly00240 Pyrimidine metabolism 2
sly01232 Nucleotide metabolism 2
sly01240 Biosynthesis of cofactors 2
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 4
sot00290 Valine, leucine and isoleucine biosynthesis 2
sot00770 Pantothenate and CoA biosynthesis 2
sot01210 2-Oxocarboxylic acid metabolism 2
sot00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 3
nta00051 Fructose and mannose metabolism 3
nta00562 Inositol phosphate metabolism 3
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
osa00970 Aminoacyl-tRNA biosynthesis 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae00906 Carotenoid biosynthesis 3
tae03010 Ribosome 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi00860 Porphyrin metabolism 3
bdi01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103829953 103841311 106411964 106407174 106382781 824557 107891077 107889637 102620885 100797953 100797537 100261300 18099995 25491555 101256028 102592632 107787906 107827713 4338981 100286008 100284489 123135740 123058690 123182225 123415151 8061756 110436842 100821601 5725035
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