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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103830017   pentatricopeptide repeat-containing protein At1g60770 
 bra-r.6   103838488   pentatricopeptide repeat-containing protein At1g60770 
 bna-r.1   106366572   pentatricopeptide repeat-containing protein At1g60770 
 bna-r.1   106449789   pentatricopeptide repeat-containing protein At1g60770-like 
 bna-r.1   106429133   pentatricopeptide repeat-containing protein At1g60770 
 ath-u.5   AT1G60770   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107886551   pentatricopeptide repeat-containing protein At1g60770 
 ghi-r.1   107909690   pentatricopeptide repeat-containing protein At1g60770 
 cit-r.1   102607465   pentatricopeptide repeat-containing protein At1g60770 
 gma-u.5   100801616   pentatricopeptide repeat-containing protein At1g60770 
 vvi-u.5   100266066   large ribosomal subunit protein mL101 (rPPR4) 
 ppo-u.5   18100411   pentatricopeptide repeat-containing protein At1g60770 
 ppo-u.5   7462981   pentatricopeptide repeat-containing protein At1g60770 
 mtr-u.5   25501457   pentatricopeptide repeat-containing protein At1g60770 
 sly-u.5   101257127   large ribosomal subunit protein mL101 (rPPR4) 
 sot-r.1   102596005   pentatricopeptide repeat-containing protein At1g60770 
 nta-r.1   107769695   large ribosomal subunit protein mL101 (rPPR4)-like 
 nta-r.1   107816691   large ribosomal subunit protein mL101 (rPPR4)-like 
 osa-u.5   4335473   large ribosomal subunit protein mL101 (rPPR4) 
 zma-u.5   100382384   uncharacterized LOC100382384 
 tae-r.2   123164151   pentatricopeptide repeat-containing protein At1g60770 
 tae-r.2   123146915   pentatricopeptide repeat-containing protein At1g60770 
 tae-r.2   123088237   pentatricopeptide repeat-containing protein At1g60770 
 hvu-r.1   123412328   pentatricopeptide repeat-containing protein At1g60770 
 sbi-r.1   8068376   pentatricopeptide repeat-containing protein At1g60770 
 bdi-r.1   100825745   pentatricopeptide repeat-containing protein At1g60770 

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Top 50 coexpressed genes to 103830017 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103830017 (bra-r.6 coexpression data)

CoexMap"103830017"


braLOC103830017 | Entrez gene ID : 103830017    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 2 1 1 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (887 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009103962.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo_mito 4,  chlo 3  (predict for XP_009103962.2)
Subcellular
localization
TargetP
mito 7,  other 5  (predict for XP_009103962.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103830017
bra-r.6
for
103838488
bna-r.1
for
106366572
bna-r.1
for
106449789
bna-r.1
for
106429133
ath-u.5
for
AT1G60770
ghi-r.1
for
107886551
ghi-r.1
for
107909690
cit-r.1
for
102607465
gma-u.5
for
100801616
vvi-u.5
for
100266066
ppo-u.5
for
18100411
ppo-u.5
for
7462981
mtr-u.5
for
25501457
sly-u.5
for
101257127
sot-r.1
for
102596005
nta-r.1
for
107769695
nta-r.1
for
107816691
osa-u.5
for
4335473
zma-u.5
for
100382384
tae-r.2
for
123164151
tae-r.2
for
123146915
tae-r.2
for
123088237
hvu-r.1
for
123412328
sbi-r.1
for
8068376
bdi-r.1
for
100825745


Ortholog ID: 9269
Species bra bra bna bna bna ath ghi ghi cit gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC103830017 LOC103838488 LOC106366572 LOC106449789 LOC106430362 AT1G60770 LOC107886551 LOC107909690 LOC102607465 LOC100801616 LOC100266066 LOC18100411 LOC7462981 LOC25501457 LOC101257127 LOC102596005 LOC107769695 LOC107816691 LOC4335473 LOC100382384 LOC123164151 LOC123146915 LOC123088237 LOC123412328 LOC8068376 LOC100825745
Function* pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770-like pentatricopeptide repeat-containing protein At1g60770 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770 large ribosomal subunit protein mL101 (rPPR4) pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770 large ribosomal subunit protein mL101 (rPPR4) pentatricopeptide repeat-containing protein At1g60770 large ribosomal subunit protein mL101 (rPPR4)-like large ribosomal subunit protein mL101 (rPPR4)-like large ribosomal subunit protein mL101 (rPPR4) uncharacterized LOC100382384 pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770 pentatricopeptide repeat-containing protein At1g60770
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 4
bra00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra00970 Aminoacyl-tRNA biosynthesis 2
bra01230 Biosynthesis of amino acids 2
bra03018 RNA degradation 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00240 Pyrimidine metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00240 Pyrimidine metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo04626 Plant-pathogen interaction 2
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly00261 Monobactam biosynthesis 2
sly00300 Lysine biosynthesis 2
sly01230 Biosynthesis of amino acids 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma03008 Ribosome biogenesis in eukaryotes 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103830017 103838488 106366572 106449789 106430362 842371 107886551 107909690 102607465 100801616 100266066 18100411 7462981 25501457 101257127 102596005 107769695 107816691 4335473 100382384 123164151 123146915 123088237 123412328 8068376 100825745
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