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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103830728   trithorax group protein osa 
 bra-r.6   103831860   cleavage stimulating factor 64 
 bna-r.1   125594932   cleavage stimulating factor 64-like 
 bna-r.1   106402545   proline-rich protein 2 
 bna-r.1   106407203   cleavage stimulating factor 64-like 
 ath-u.5   ESP1   hydroxyproline-rich glycoprotein family protein 
 ghi-r.1   107906303   cleavage stimulating factor 64 
 ghi-r.1   107923169   cleavage stimulating factor 64 
 ghi-r.1   107933318   cleavage stimulating factor 64 
 cit-r.1   102628566   uncharacterized LOC102628566 
 gma-u.5   548018   proline-rich protein precursor 
 gma-u.5   100801770   cleavage stimulating factor 64 
 gma-u.5   100811481   cleavage stimulating factor 64 
 vvi-u.5   100255879   cleavage stimulating factor 64 
 vvi-u.5   104882343   uncharacterized LOC104882343 
 vvi-u.5   100261251   uncharacterized LOC100261251 
 ppo-u.5   7487072   cleavage stimulating factor 64 
 mtr-u.5   11411154   cyclin-K 
 sly-u.5   101248183   cleavage stimulating factor 64 
 sot-r.1   102593956   cleavage stimulating factor 64 
 nta-r.1   107806009   uncharacterized LOC107806009 
 nta-r.1   107821640   uncharacterized LOC107821640 
 nta-r.1   107830391   uncharacterized LOC107830391 
 osa-u.5   4339300   cleavage stimulating factor 64 
 zma-u.5   103630598   pollen-specific leucine-rich repeat extensin-like protein 3 
 tae-r.2   123062799   basic salivary proline-rich protein 1 
 tae-r.2   123139962   bromodomain-containing protein 4 
 tae-r.2   123182619   bromodomain-containing protein 4 
 hvu-r.1   123447242   cleavage stimulating factor 64 
 sbi-r.1   110430594   pollen-specific leucine-rich repeat extensin-like protein 3 
 sbi-r.1   8076706   extensin 
 bdi-r.1   100837175   cleavage stimulating factor 64 

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Top 50 coexpressed genes to 103830728 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103830728 (bra-r.6 coexpression data)

CoexMap"103830728"


braLOC103830728 | Entrez gene ID : 103830728    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 3 1 3 3 1 1 1 1 3 1 1 3 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031124 [list] [network] mRNA 3'-end processing  (15 genes)  IEA  
GO CC
GO MF
Protein XP_009104790.1 [sequence] [blastp]
XP_009104791.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1,  extr 1  (predict for XP_009104790.1)
nucl 9,  mito 1,  extr 1  (predict for XP_009104791.1)
Subcellular
localization
TargetP
other 9  (predict for XP_009104790.1)
other 9  (predict for XP_009104791.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103830728
bra-r.6
for
103831860
bna-r.1
for
125594932
bna-r.1
for
106402545
bna-r.1
for
106407203
ath-u.5
for
ESP1
ghi-r.1
for
107906303
ghi-r.1
for
107923169
ghi-r.1
for
107933318
cit-r.1
for
102628566
gma-u.5
for
548018
gma-u.5
for
100801770
gma-u.5
for
100811481
vvi-u.5
for
100255879
vvi-u.5
for
104882343
vvi-u.5
for
100261251
ppo-u.5
for
7487072
mtr-u.5
for
11411154
sly-u.5
for
101248183
sot-r.1
for
102593956
nta-r.1
for
107806009
nta-r.1
for
107821640
nta-r.1
for
107830391
osa-u.5
for
4339300
zma-u.5
for
103630598
tae-r.2
for
123062799
tae-r.2
for
123139962
tae-r.2
for
123182619
hvu-r.1
for
123447242
sbi-r.1
for
110430594
sbi-r.1
for
8076706
bdi-r.1
for
100837175


Ortholog ID: 4478
Species bra bra bna bna bna ath ghi ghi ghi cit gma gma gma vvi vvi vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi sbi bdi
Symbol LOC103830728 LOC103831860 LOC125594932 LOC106407203 LOC106430131 ESP1 LOC107944743 LOC121230628 LOC107892032 LOC102628566 LOC548018 LOC100811481 LOC100782099 LOC100255879 LOC104882343 LOC100261251 LOC7487072 LOC11411154 LOC101248183 LOC102593956 LOC107806009 LOC107821640 LOC107800405 LOC4339300 LOC103630598 LOC123062799 LOC123139962 LOC123182619 LOC123447242 LOC110430594 LOC8076706 LOC100837175
Function* trithorax group protein osa cleavage stimulating factor 64 cleavage stimulating factor 64-like cleavage stimulating factor 64-like cleavage stimulating factor 64-like hydroxyproline-rich glycoprotein family protein cleavage stimulating factor 64-like uncharacterized LOC121230628 cleavage stimulating factor 64 uncharacterized LOC102628566 proline-rich protein precursor cleavage stimulating factor 64 cleavage stimulating factor 64 cleavage stimulating factor 64 uncharacterized LOC104882343 uncharacterized LOC100261251 cleavage stimulating factor 64 cyclin-K cleavage stimulating factor 64 cleavage stimulating factor 64 uncharacterized LOC107806009 uncharacterized LOC107821640 uncharacterized LOC107800405 cleavage stimulating factor 64 pollen-specific leucine-rich repeat extensin-like protein 3 basic salivary proline-rich protein 1 bromodomain-containing protein 4 bromodomain-containing protein 4 cleavage stimulating factor 64 pollen-specific leucine-rich repeat extensin-like protein 3 extensin cleavage stimulating factor 64
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03082 ATP-dependent chromatin remodeling 2
bra03015 mRNA surveillance pathway 2
bra04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03082 ATP-dependent chromatin remodeling 3
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04144 Endocytosis 2
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03420 Nucleotide excision repair 2
vvi03013 Nucleocytoplasmic transport 2
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 3
tae00785 Lipoic acid metabolism 2
tae03040 Spliceosome 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae04144 Endocytosis 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103830728 103831860 125594932 106407203 106430131 843720 107944743 121230628 107892032 102628566 548018 100811481 100782099 100255879 104882343 100261251 7487072 11411154 101248183 102593956 107806009 107821640 107800405 4339300 103630598 123062799 123139962 123182619 123447242 110430594 8076706 100837175
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