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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103863201   gibberellin 20 oxidase 1 
 bra-r.6   103852126   gibberellin 20 oxidase 2 
 ath-u.5   GA20OX2   gibberellin 20 oxidase 2 
 ath-u.5   GA20OX3   gibberellin 20-oxidase 3 
 ghi-r.1   107888504   gibberellin 20 oxidase 1-B 
 ghi-r.1   107888749   gibberellin 20 oxidase 1 
 ghi-r.1   107890722   gibberellin 20 oxidase 1 
 cit-r.1   102631342   gibberellin 20 oxidase 1-D 
 cit-r.1   102608767   gibberellin 20 oxidase 1 
 gma-u.5   GA20OX1   gibberellin 20 oxidase 1 
 vvi-u.5   100267658   gibberellin 20 oxidase 1-D 
 vvi-u.5   100257500   gibberellin 20 oxidase 1-D-like 
 ppo-u.5   7454460   gibberellin 20 oxidase 1 
 mtr-u.5   25500998   gibberellin 20 oxidase 2 
 mtr-u.5   11424005   gibberellin 20 oxidase 2 
 sly-u.5   GA20ox1   gibberellin 20-oxidase-1 
 sot-r.1   102597267   gibberellin 20 oxidase 1 
 sot-r.1   102598207   gibberellin 20 oxidase 1-like 
 sot-r.1   102584697   gibberellin 20 oxidase 1-D 
 nta-r.1   107803183   gibberellin 20 oxidase 1 
 osa-u.5   4334841   gibberellin 20 oxidase 1-like 
 osa-u.5   4325003   gibberellin 20 oxidase 2-like 
 osa-u.5   9269090   gibberellin 20 oxidase 2 
 zma-u.5   100276935   gibberellin 20-oxidase 3 
 zma-u.5   107521947   gibberellin 20 oxidase 4 
 zma-u.5   778427   gibberellin 20 oxidase 1 
 tae-r.2   123080128   gibberellin 20 oxidase 2 
 tae-r.2   543326   gibberellin 20 oxidase 1-A-like 
 hvu-r.1   123395214   gibberellin 20 oxidase 1-B 
 hvu-r.1   123445118   gibberellin 20 oxidase 2-like 
 sbi-r.1   8063144   gibberellin 20 oxidase 2 
 sbi-r.1   8061378   gibberellin 20 oxidase 1-D 
 bdi-r.1   100823873   gibberellin 20 oxidase 2 
 bdi-r.1   100837430   gibberellin 20 oxidase 1-D 

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Top 50 coexpressed genes to 103863201 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103863201 (bra-r.6 coexpression data)

CoexMap"103833135"


braLOC103833135 | Entrez gene ID : 103833135    
Species bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bna
Paralog 2 2 3 2 1 2 1 2 1 3 1 3 3 2 2 2 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00904 [list] [network] Diterpenoid biosynthesis (42 genes)
GO BP
GO:0009686 [list] [network] gibberellin biosynthetic process  (20 genes)  IEA  
GO:0009826 [list] [network] unidimensional cell growth  (30 genes)  IEA  
GO:0009908 [list] [network] flower development  (58 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (177 genes)  IEA  
GO CC
GO MF
GO:0045544 [list] [network] gibberellin 20-oxidase activity  (11 genes)  IEA  
Protein XP_009107482.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  vacu 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_009107482.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_009107482.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103863201
bra-r.6
for
103852126
ath-u.5
for
GA20OX2
ath-u.5
for
GA20OX3
ghi-r.1
for
107888504
ghi-r.1
for
107888749
ghi-r.1
for
107890722
cit-r.1
for
102631342
cit-r.1
for
102608767
gma-u.5
for
GA20OX1
vvi-u.5
for
100267658
vvi-u.5
for
100257500
ppo-u.5
for
7454460
mtr-u.5
for
25500998
mtr-u.5
for
11424005
sly-u.5
for
GA20ox1
sot-r.1
for
102597267
sot-r.1
for
102598207
sot-r.1
for
102584697
nta-r.1
for
107803183
osa-u.5
for
4334841
osa-u.5
for
4325003
osa-u.5
for
9269090
zma-u.5
for
100276935
zma-u.5
for
107521947
zma-u.5
for
778427
tae-r.2
for
123080128
tae-r.2
for
543326
hvu-r.1
for
123395214
hvu-r.1
for
123445118
sbi-r.1
for
8063144
sbi-r.1
for
8061378
bdi-r.1
for
100823873
bdi-r.1
for
100837430


Ortholog ID: 778
Species bra bna ath ath ghi ghi ghi cit gma vvi ppo mtr mtr sly sot sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC103852126 LOC106446088 GA20OX2 GA20OX3 LOC107888749 LOC107890722 LOC107930190 LOC102612832 GA20OX1 LOC100232996 LOC7482127 LOC11424005 LOC11415102 GA20ox1 LOC102598207 LOC102581792 LOC107803183 LOC107825965 LOC107775797 LOC4334841 LOC4325003 LOC9269090 LOC100276935 LOC107521947 LOC778427 LOC123093081 LOC543325 LOC123395214 LOC123445118 LOC8063144 LOC8061378 LOC100823873 LOC100837430
Function* gibberellin 20 oxidase 2 gibberellin 20 oxidase 3 gibberellin 20 oxidase 2 gibberellin 20-oxidase 3 gibberellin 20 oxidase 1 gibberellin 20 oxidase 1 gibberellin 20 oxidase 1-D gibberellin 20 oxidase 1-D-like gibberellin 20 oxidase 1 gibberellin 20-oxidase gibberellin 20 oxidase 2 gibberellin 20 oxidase 2 gibberellin 20 oxidase 1 gibberellin 20-oxidase-1 gibberellin 20 oxidase 1-like gibberellin 20 oxidase 1 gibberellin 20 oxidase 1 gibberellin 20 oxidase 1-like gibberellin 20 oxidase 1-like gibberellin 20 oxidase 1-like gibberellin 20 oxidase 2-like gibberellin 20 oxidase 2 gibberellin 20-oxidase 3 gibberellin 20 oxidase 4 gibberellin 20 oxidase 1 gibberellin 20 oxidase 2 gibberellin 20 oxidase 1-D-like gibberellin 20 oxidase 1-B gibberellin 20 oxidase 2-like gibberellin 20 oxidase 2 gibberellin 20 oxidase 1-D gibberellin 20 oxidase 2 gibberellin 20 oxidase 1-D
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
ath00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 5
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 5
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 5
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo02010 ABC transporters 2
ppo00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 4
mtr01230 Biosynthesis of amino acids 3
mtr00904 Diterpenoid biosynthesis 2
mtr00270 Cysteine and methionine metabolism 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr01230 Biosynthesis of amino acids 2
mtr00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00910 Nitrogen metabolism 3
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly04075 Plant hormone signal transduction 2
sly00904 Diterpenoid biosynthesis 2
sly01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 3
zma00904 Diterpenoid biosynthesis 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 8
zma00380 Tryptophan metabolism 4
zma00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00910 Nitrogen metabolism 3
tae00904 Diterpenoid biosynthesis 3
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04144 Endocytosis 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
bdi00564 Glycerophospholipid metabolism 2
bdi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi00564 Glycerophospholipid metabolism 2
bdi00904 Diterpenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103852126 106446088 835256 830611 107888749 107890722 107930190 102612832 100777224 100232996 7482127 11424005 11415102 543553 102598207 102581792 107803183 107825965 107775797 4334841 4325003 9269090 100276935 107521947 778427 123093081 543325 123395214 123445118 8063144 8061378 100823873 100837430
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