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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107888749   gibberellin 20 oxidase 1 
 ghi-r.1   107890722   gibberellin 20 oxidase 1 
 ghi-r.1   107913166   gibberellin 20 oxidase 1-D 
 ath-u.5   GA20OX1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-u.5   GA20OX2   gibberellin 20 oxidase 2 
 bra-r.6   103863201   gibberellin 20 oxidase 1 
 bna-r.1   106446088   gibberellin 20 oxidase 3 
 cit-r.1   102626920   gibberellin 20 oxidase 1-B-like 
 cit-r.1   102612832   gibberellin 20 oxidase 1-D-like 
 cit-r.1   102631342   gibberellin 20 oxidase 1-D 
 vvi-u.5   100267658   gibberellin 20 oxidase 1-D 
 vvi-u.5   100232996   gibberellin 20-oxidase 
 ppo-u.5   7482127   gibberellin 20 oxidase 2 
 mtr-u.5   25500998   gibberellin 20 oxidase 2 
 mtr-u.5   25497212   gibberellin 20 oxidase 1 
 sot-r.1   102581792   gibberellin 20 oxidase 1 
 sot-r.1   102584697   gibberellin 20 oxidase 1-D 
 nta-r.1   107775797   gibberellin 20 oxidase 1-like 
 nta-r.1   107825965   gibberellin 20 oxidase 1-like 
 osa-u.5   4325003   gibberellin 20 oxidase 2-like 
 osa-u.5   4334841   gibberellin 20 oxidase 1-like 
 osa-u.5   9269090   gibberellin 20 oxidase 2 
 zma-u.5   107521947   gibberellin 20 oxidase 4 
 zma-u.5   778427   gibberellin 20 oxidase 1 
 zma-u.5   100276935   gibberellin 20-oxidase 3 
 tae-r.2   123170018   gibberellin 20 oxidase 2 
 tae-r.2   543326   gibberellin 20 oxidase 1-A-like 
 tae-r.2   543327   gibberellin 20 oxidase 1-A-like 
 hvu-r.1   123395214   gibberellin 20 oxidase 1-B 
 hvu-r.1   123445118   gibberellin 20 oxidase 2-like 
 sbi-r.1   8061378   gibberellin 20 oxidase 1-D 
 sbi-r.1   8063144   gibberellin 20 oxidase 2 
 bdi-r.1   100823873   gibberellin 20 oxidase 2 
 bdi-r.1   100837430   gibberellin 20 oxidase 1-D 

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Top 50 coexpressed genes to 107888749 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107888749 (ghi-r.1 coexpression data)

CoexMap"107888749"


ghiLOC107888749 | Entrez gene ID : 107888749    
Species ghi ath bra bna cit vvi ppo mtr sot nta osa zma tae hvu sbi bdi gma cre sly
Paralog 3 2 1 1 3 2 1 2 2 2 3 3 3 2 2 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00904 [list] [network] Diterpenoid biosynthesis (74 genes)
GO BP
GO:0009686 [list] [network] gibberellin biosynthetic process  (32 genes)  IEA  
GO:0009826 [list] [network] unidimensional cell growth  (42 genes)  IEA  
GO:0009908 [list] [network] flower development  (65 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (330 genes)  IEA  
GO CC
GO MF
GO:0045544 [list] [network] gibberellin 20-oxidase activity  (13 genes)  IEA  
Protein XP_016668427.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  chlo 1,  mito 1,  golg 1  (predict for XP_016668427.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016668427.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107888749
ghi-r.1
for
107890722
ghi-r.1
for
107913166
ath-u.5
for
GA20OX1
ath-u.5
for
GA20OX2
bra-r.6
for
103863201
bna-r.1
for
106446088
cit-r.1
for
102626920
cit-r.1
for
102612832
cit-r.1
for
102631342
vvi-u.5
for
100267658
vvi-u.5
for
100232996
ppo-u.5
for
7482127
mtr-u.5
for
25500998
mtr-u.5
for
25497212
sot-r.1
for
102581792
sot-r.1
for
102584697
nta-r.1
for
107775797
nta-r.1
for
107825965
osa-u.5
for
4325003
osa-u.5
for
4334841
osa-u.5
for
9269090
zma-u.5
for
107521947
zma-u.5
for
778427
zma-u.5
for
100276935
tae-r.2
for
123170018
tae-r.2
for
543326
tae-r.2
for
543327
hvu-r.1
for
123395214
hvu-r.1
for
123445118
sbi-r.1
for
8061378
sbi-r.1
for
8063144
bdi-r.1
for
100823873
bdi-r.1
for
100837430


Ortholog ID: 778
Species ghi ghi ghi ath ath bra bna cit gma vvi ppo mtr mtr sly sot sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC107888749 LOC107890722 LOC107930190 GA20OX2 GA20OX3 LOC103852126 LOC106446088 LOC102612832 GA20OX1 LOC100232996 LOC7482127 LOC11415102 LOC11424005 GA20ox1 LOC102581792 LOC102598207 LOC107775797 LOC107825965 LOC107803183 LOC4325003 LOC4334841 LOC9269090 LOC107521947 LOC778427 LOC100276935 LOC123093081 LOC543325 LOC123395214 LOC123445118 LOC8061378 LOC8063144 LOC100823873 LOC100837430
Function* gibberellin 20 oxidase 1 gibberellin 20 oxidase 1 gibberellin 20 oxidase 1-D gibberellin 20 oxidase 2 gibberellin 20-oxidase 3 gibberellin 20 oxidase 2 gibberellin 20 oxidase 3 gibberellin 20 oxidase 1-D-like gibberellin 20 oxidase 1 gibberellin 20-oxidase gibberellin 20 oxidase 2 gibberellin 20 oxidase 1 gibberellin 20 oxidase 2 gibberellin 20-oxidase-1 gibberellin 20 oxidase 1 gibberellin 20 oxidase 1-like gibberellin 20 oxidase 1-like gibberellin 20 oxidase 1-like gibberellin 20 oxidase 1 gibberellin 20 oxidase 2-like gibberellin 20 oxidase 1-like gibberellin 20 oxidase 2 gibberellin 20 oxidase 4 gibberellin 20 oxidase 1 gibberellin 20-oxidase 3 gibberellin 20 oxidase 2 gibberellin 20 oxidase 1-D-like gibberellin 20 oxidase 1-B gibberellin 20 oxidase 2-like gibberellin 20 oxidase 1-D gibberellin 20 oxidase 2 gibberellin 20 oxidase 2 gibberellin 20 oxidase 1-D
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 5
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 5
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 5
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
ath00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo02010 ABC transporters 2
ppo00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr01230 Biosynthesis of amino acids 2
mtr00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 4
mtr01230 Biosynthesis of amino acids 3
mtr00904 Diterpenoid biosynthesis 2
mtr00270 Cysteine and methionine metabolism 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00910 Nitrogen metabolism 3
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly04075 Plant hormone signal transduction 2
sly00904 Diterpenoid biosynthesis 2
sly01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 8
zma00380 Tryptophan metabolism 4
zma00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 3
zma00904 Diterpenoid biosynthesis 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00910 Nitrogen metabolism 3
tae00904 Diterpenoid biosynthesis 3
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04144 Endocytosis 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
bdi00564 Glycerophospholipid metabolism 2
bdi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi00564 Glycerophospholipid metabolism 2
bdi00904 Diterpenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107888749 107890722 107930190 835256 830611 103852126 106446088 102612832 100777224 100232996 7482127 11415102 11424005 543553 102581792 102598207 107775797 107825965 107803183 4325003 4334841 9269090 107521947 778427 100276935 123093081 543325 123395214 123445118 8061378 8063144 100823873 100837430
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