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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103838673   AP-3 complex subunit mu 
 bna-r.1   106432619   AP-3 complex subunit mu 
 bna-r.1   111200946   AP-3 complex subunit mu 
 ath-u.5   ZIP4   Clathrin adaptor complexes medium subunit family protein 
 ghi-r.1   107893296   AP-3 complex subunit mu 
 cit-r.1   102607814   AP-3 complex subunit mu 
 gma-u.5   100799191   AP-3 complex subunit mu-1-like 
 gma-u.5   100791605   AP-3 complex subunit mu 
 gma-u.5   100782926   AP-3 complex subunit mu 
 vvi-u.5   100251056   AP-3 complex subunit mu 
 ppo-u.5   18098558   AP-3 complex subunit mu 
 ppo-u.5   7478887   AP-3 complex subunit mu 
 mtr-u.5   25499635   AP-3 complex subunit mu 
 sly-u.5   101256128   AP-3 complex subunit mu 
 sot-r.1   102588988   AP-3 complex subunit mu 
 nta-r.1   107778979   AP-3 complex subunit mu 
 nta-r.1   107789986   AP-3 complex subunit mu-like 
 osa-u.5   4338648   AP-3 complex subunit mu 
 zma-u.5   100273129   uncharacterized LOC100273129 
 tae-r.2   123181847   AP-3 complex subunit mu 
 tae-r.2   123130794   AP-3 complex subunit mu 
 tae-r.2   123053946   AP-3 complex subunit mu 
 hvu-r.1   123439956   AP-3 complex subunit mu 
 sbi-r.1   8068248   AP-3 complex subunit mu 
 bdi-r.1   100837988   AP-3 complex subunit mu 

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Top 50 coexpressed genes to 103838673 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103838673 (bra-r.6 coexpression data)

CoexMap"103838673"


braLOC103838673 | Entrez gene ID : 103838673    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 1 1 3 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp04142 [list] [network] Lysosome (124 genes)
GO BP
GO:0006897 [list] [network] endocytosis  (118 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (422 genes)  IEA  
GO CC
GO:0030131 [list] [network] clathrin adaptor complex  (22 genes)  IEA  
GO:0031410 [list] [network] cytoplasmic vesicle  (500 genes)  IEA  
GO MF
Protein XP_009113369.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_nucl 4,  nucl 3,  chlo 1,  mito 1,  extr 1  (predict for XP_009113369.2)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_009113369.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103838673
bna-r.1
for
106432619
bna-r.1
for
111200946
ath-u.5
for
ZIP4
ghi-r.1
for
107893296
cit-r.1
for
102607814
gma-u.5
for
100799191
gma-u.5
for
100791605
gma-u.5
for
100782926
vvi-u.5
for
100251056
ppo-u.5
for
18098558
ppo-u.5
for
7478887
mtr-u.5
for
25499635
sly-u.5
for
101256128
sot-r.1
for
102588988
nta-r.1
for
107778979
nta-r.1
for
107789986
osa-u.5
for
4338648
zma-u.5
for
100273129
tae-r.2
for
123181847
tae-r.2
for
123130794
tae-r.2
for
123053946
hvu-r.1
for
123439956
sbi-r.1
for
8068248
bdi-r.1
for
100837988


Ortholog ID: 10523
Species bra bna bna ath ghi cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC103838673 LOC106432619 LOC111200946 ZIP4 LOC107893296 LOC102607814 LOC100799191 LOC100791605 LOC100782926 LOC100251056 LOC18098558 LOC7478887 LOC25499635 LOC101256128 LOC102588988 LOC107778979 LOC107789986 LOC4338648 LOC100273129 LOC123181847 LOC123130794 LOC123053946 LOC123439956 LOC8068248 LOC100837988
Function* AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu Clathrin adaptor complexes medium subunit family protein AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu-1-like AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu-like AP-3 complex subunit mu uncharacterized LOC100273129 AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu AP-3 complex subunit mu
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 4
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00010 Glycolysis / Gluconeogenesis 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 3
sly04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta04142 Lysosome 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa00062 Fatty acid elongation 2
osa01040 Biosynthesis of unsaturated fatty acids 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae04130 SNARE interactions in vesicular transport 3
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 4
hvu04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi00010 Glycolysis / Gluconeogenesis 2
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103838673 106432619 111200946 842113 107893296 102607814 100799191 100791605 100782926 100251056 18098558 7478887 25499635 101256128 102588988 107778979 107789986 4338648 100273129 123181847 123130794 123053946 123439956 8068248 100837988
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