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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103841636   eukaryotic translation initiation factor 3 subunit E 
 bra-r.6   103863053   eukaryotic translation initiation factor 3 subunit E 
 bna-r.1   111214977   eukaryotic translation initiation factor 3 subunit E 
 bna-r.1   106451582   eukaryotic translation initiation factor 3 subunit E 
 bna-r.1   106445202   eukaryotic translation initiation factor 3 subunit E 
 ath-u.5   EIF3E   eukaryotic translation initiation factor 3E 
 ghi-r.1   121209496   eukaryotic translation initiation factor 3 subunit E 
 ghi-r.1   107925876   eukaryotic translation initiation factor 3 subunit E 
 cit-r.1   102609822   eukaryotic translation initiation factor 3 subunit E 
 gma-u.5   100797748   eukaryotic translation initiation factor 3 subunit E 
 gma-u.5   100788418   eukaryotic translation initiation factor 3 subunit E 
 vvi-u.5   100243469   eukaryotic translation initiation factor 3 subunit E 
 ppo-u.5   7483968   eukaryotic translation initiation factor 3 subunit E 
 ppo-u.5   7473602   eukaryotic translation initiation factor 3 subunit E 
 mtr-u.5   25487375   eukaryotic translation initiation factor 3 subunit E 
 mtr-u.5   25483348   eukaryotic translation initiation factor 3 subunit E 
 sly-u.5   101265974   eukaryotic translation initiation factor 3 subunit E 
 sot-r.1   102606100   eukaryotic translation initiation factor 3 subunit E 
 nta-r.1   107767397   eukaryotic translation initiation factor 3 subunit E 
 nta-r.1   107801330   eukaryotic translation initiation factor 3 subunit E 
 osa-u.5   4342489   eukaryotic translation initiation factor 3 subunit E 
 osa-u.5   4342741   eukaryotic translation initiation factor 3 subunit E 
 osa-u.5   4343324   eukaryotic translation initiation factor 3 subunit E 
 zma-u.5   100284265   eukaryotic translation initiation factor 3 subunit 6 
 zma-u.5   100193141   uncharacterized LOC100193141 
 tae-r.2   123112367   eukaryotic translation initiation factor 3 subunit E 
 tae-r.2   123121895   eukaryotic translation initiation factor 3 subunit E 
 tae-r.2   123104144   eukaryotic translation initiation factor 3 subunit E 
 hvu-r.1   123399314   eukaryotic translation initiation factor 3 subunit E 
 sbi-r.1   110432469   eukaryotic translation initiation factor 3 subunit E 
 bdi-r.1   100827915   eukaryotic translation initiation factor 3 subunit E 
 cre-r.1   CHLRE_12g498100v5   uncharacterized protein 

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Top 50 coexpressed genes to 103841636 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103841636 (bra-r.6 coexpression data)

CoexMap"103841636"


braLOC103841636 | Entrez gene ID : 103841636    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 2 1 2 1 2 2 1 1 2 3 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006413 [list] [network] translational initiation  (101 genes)  IEA  
GO CC
GO:0005852 [list] [network] eukaryotic translation initiation factor 3 complex  (40 genes)  IEA  
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (128 genes)  IEA  
Protein XP_009116433.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1  (predict for XP_009116433.2)
Subcellular
localization
TargetP
other 8  (predict for XP_009116433.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103841636
bra-r.6
for
103863053
bna-r.1
for
111214977
bna-r.1
for
106451582
bna-r.1
for
106445202
ath-u.5
for
EIF3E
ghi-r.1
for
121209496
ghi-r.1
for
107925876
cit-r.1
for
102609822
gma-u.5
for
100797748
gma-u.5
for
100788418
vvi-u.5
for
100243469
ppo-u.5
for
7483968
ppo-u.5
for
7473602
mtr-u.5
for
25487375
mtr-u.5
for
25483348
sly-u.5
for
101265974
sot-r.1
for
102606100
nta-r.1
for
107767397
nta-r.1
for
107801330
osa-u.5
for
4342489
osa-u.5
for
4342741
osa-u.5
for
4343324
zma-u.5
for
100284265
zma-u.5
for
100193141
tae-r.2
for
123112367
tae-r.2
for
123121895
tae-r.2
for
123104144
hvu-r.1
for
123399314
sbi-r.1
for
110432469
bdi-r.1
for
100827915
cre-r.1
for
CHLRE_12g498100v5


Ortholog ID: 6024
Species bra bra bna bna bna ath ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa osa osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC103841636 LOC103863053 LOC111214977 LOC106451582 LOC106415887 EIF3E LOC107925876 LOC107925874 LOC102609822 LOC100797748 LOC100788418 LOC100243469 LOC7483968 LOC7473602 LOC25487375 LOC25483348 LOC101265974 LOC102606100 LOC107767397 LOC107801330 LOC4342489 LOC4342741 LOC4343324 LOC100284265 LOC100193141 LOC123112367 LOC123121895 LOC123104144 LOC123399314 LOC110432469 LOC100827915 CHLRE_12g498100v5
Function* eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E-like eukaryotic translation initiation factor 3E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit 6 uncharacterized LOC100193141 eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E eukaryotic translation initiation factor 3 subunit E uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00300 Lysine biosynthesis 2
ghi00470 D-Amino acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00300 Lysine biosynthesis 2
ghi00470 D-Amino acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 6
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot03040 Spliceosome 4
sot04626 Plant-pathogen interaction 3
sot03010 Ribosome 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 8
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 5
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 8
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 8
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103841636 103863053 111214977 106451582 106415887 824896 107925876 107925874 102609822 100797748 100788418 100243469 7483968 7473602 25487375 25483348 101265974 102606100 107767397 107801330 4342489 4342741 4343324 100284265 100193141 123112367 123121895 123104144 123399314 110432469 100827915 5727925
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