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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103841859   E3 ubiquitin-protein ligase RDUF2 
 ath-u.5   AT3G60080   RING/U-box superfamily protein 
 gma-u.5   100782164   E3 ubiquitin-protein ligase RNF181 homolog 
 vvi-u.5   100244303   E3 ubiquitin-protein ligase RING1-like 
 ppo-u.5   18095004   probable E3 ubiquitin-protein ligase RHC2A 
 mtr-u.5   25486872   E3 ubiquitin-protein ligase RNF13 
 sly-u.5   101256139   E3 ubiquitin-protein ligase RING1-like 

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Top 50 coexpressed genes to 103841859 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103841859 (bra-r.6 coexpression data)

CoexMap"103841859"


braLOC103841859 | Entrez gene ID : 103841859    
Species bra ath gma vvi ppo mtr sly bdi hvu cit bna sbi ghi osa sot nta cre tae zma
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (533 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (295 genes)  IEA  
Protein XP_009116683.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  extr 2,  chlo 1,  cyto 1  (predict for XP_009116683.2)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_009116683.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103841859
ath-u.5
for
AT3G60080
gma-u.5
for
100782164
vvi-u.5
for
100244303
ppo-u.5
for
18095004
mtr-u.5
for
25486872
sly-u.5
for
101256139


Ortholog ID: 13437
Species bra bna bna ath gma vvi ppo mtr sly sot nta nta
Symbol LOC103841859 LOC106411818 LOC106368410 AT3G60080 LOC100782164 LOC100244303 LOC18095004 LOC25486872 LOC101256139 LOC102587651 LOC107828519 LOC107792592
Function* E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF2-like RING/U-box superfamily protein E3 ubiquitin-protein ligase RNF181 homolog E3 ubiquitin-protein ligase RING1-like probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RNF13 E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 4
bna00280 Valine, leucine and isoleucine degradation 4
bna00650 Butanoate metabolism 4
bna04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 4
bna00750 Vitamin B6 metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00300 Lysine biosynthesis 2
gma00470 D-Amino acid metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr01210 2-Oxocarboxylic acid metabolism 2
mtr01230 Biosynthesis of amino acids 2
mtr00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 2
sly00220 Arginine biosynthesis 2
sly01210 2-Oxocarboxylic acid metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot03250 Viral life cycle - HIV-1 2
sot03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103841859 106411818 106368410 825178 100782164 100244303 18095004 25486872 101256139 102587651 107828519 107792592
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